Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01621

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01619 and H281DRAFT_01620 are separated by 166 nucleotidesH281DRAFT_01620 and H281DRAFT_01621 are separated by 36 nucleotidesH281DRAFT_01621 and H281DRAFT_01622 overlap by 1 nucleotides H281DRAFT_01619: H281DRAFT_01619 - hypothetical protein, at 500,441 to 500,854 _01619 H281DRAFT_01620: H281DRAFT_01620 - LexA-binding, inner membrane-associated putative hydrolase, at 501,021 to 501,539 _01620 H281DRAFT_01621: H281DRAFT_01621 - transcriptional regulator, AraC family, at 501,576 to 502,424 _01621 H281DRAFT_01622: H281DRAFT_01622 - serine O-acetyltransferase, at 502,424 to 503,350 _01622 Position (kb) 501 502 503Strain fitness (log2 ratio) -2 -1 0 1at 500.606 kb on + strand, within H281DRAFT_01619at 500.606 kb on + strand, within H281DRAFT_01619at 500.607 kb on - strand, within H281DRAFT_01619at 500.607 kb on - strand, within H281DRAFT_01619at 500.634 kb on - strand, within H281DRAFT_01619at 500.732 kb on + strand, within H281DRAFT_01619at 500.901 kb on - strandat 501.121 kb on - strand, within H281DRAFT_01620at 501.121 kb on - strand, within H281DRAFT_01620at 501.303 kb on + strand, within H281DRAFT_01620at 501.304 kb on - strand, within H281DRAFT_01620at 501.511 kb on + strandat 501.512 kb on - strandat 501.552 kb on + strandat 502.153 kb on + strand, within H281DRAFT_01621at 502.274 kb on + strand, within H281DRAFT_01621at 502.547 kb on + strand, within H281DRAFT_01622at 502.575 kb on + strand, within H281DRAFT_01622at 503.136 kb on + strand, within H281DRAFT_01622at 503.140 kb on - strand, within H281DRAFT_01622at 503.140 kb on - strand, within H281DRAFT_01622at 503.190 kb on - strand, within H281DRAFT_01622

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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500,606 + H281DRAFT_01619 0.40 -0.7
500,606 + H281DRAFT_01619 0.40 -1.0
500,607 - H281DRAFT_01619 0.40 +0.5
500,607 - H281DRAFT_01619 0.40 -0.4
500,634 - H281DRAFT_01619 0.47 +0.2
500,732 + H281DRAFT_01619 0.70 +0.0
500,901 - +0.1
501,121 - H281DRAFT_01620 0.19 +0.3
501,121 - H281DRAFT_01620 0.19 -0.0
501,303 + H281DRAFT_01620 0.54 +0.7
501,304 - H281DRAFT_01620 0.55 +0.0
501,511 + -1.3
501,512 - +0.3
501,552 + +0.1
502,153 + H281DRAFT_01621 0.68 +0.5
502,274 + H281DRAFT_01621 0.82 +0.9
502,547 + H281DRAFT_01622 0.13 -2.5
502,575 + H281DRAFT_01622 0.16 -0.0
503,136 + H281DRAFT_01622 0.77 -0.0
503,140 - H281DRAFT_01622 0.77 +0.1
503,140 - H281DRAFT_01622 0.77 -0.9
503,190 - H281DRAFT_01622 0.83 -0.7

Or see this region's nucleotide sequence