Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01467

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01466 and H281DRAFT_01467 overlap by 16 nucleotidesH281DRAFT_01467 and H281DRAFT_01468 are separated by 56 nucleotides H281DRAFT_01466: H281DRAFT_01466 - Predicted NAD/FAD-binding protein, at 332,966 to 334,267 _01466 H281DRAFT_01467: H281DRAFT_01467 - hypothetical protein, at 334,252 to 335,088 _01467 H281DRAFT_01468: H281DRAFT_01468 - cyclopropane-fatty-acyl-phospholipid synthase, at 335,145 to 336,356 _01468 Position (kb) 334 335 336Strain fitness (log2 ratio) -1 0 1 2 3at 333.310 kb on + strand, within H281DRAFT_01466at 333.372 kb on + strand, within H281DRAFT_01466at 333.372 kb on + strand, within H281DRAFT_01466at 333.535 kb on - strand, within H281DRAFT_01466at 333.955 kb on + strand, within H281DRAFT_01466at 333.977 kb on + strand, within H281DRAFT_01466at 334.082 kb on + strand, within H281DRAFT_01466at 334.396 kb on + strandat 334.539 kb on - strand, within H281DRAFT_01467at 334.709 kb on - strand, within H281DRAFT_01467at 334.709 kb on - strand, within H281DRAFT_01467at 334.764 kb on + strand, within H281DRAFT_01467at 334.811 kb on - strand, within H281DRAFT_01467at 335.145 kb on - strandat 335.556 kb on + strand, within H281DRAFT_01468at 335.556 kb on + strand, within H281DRAFT_01468at 335.557 kb on - strand, within H281DRAFT_01468at 335.607 kb on + strand, within H281DRAFT_01468at 335.671 kb on - strand, within H281DRAFT_01468at 335.688 kb on - strand, within H281DRAFT_01468at 335.688 kb on - strand, within H281DRAFT_01468at 335.830 kb on + strand, within H281DRAFT_01468at 335.898 kb on + strand, within H281DRAFT_01468

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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333,310 + H281DRAFT_01466 0.26 +1.1
333,372 + H281DRAFT_01466 0.31 +0.3
333,372 + H281DRAFT_01466 0.31 +0.3
333,535 - H281DRAFT_01466 0.44 +0.5
333,955 + H281DRAFT_01466 0.76 +0.6
333,977 + H281DRAFT_01466 0.78 +0.5
334,082 + H281DRAFT_01466 0.86 -0.3
334,396 + +1.8
334,539 - H281DRAFT_01467 0.34 +0.5
334,709 - H281DRAFT_01467 0.55 +0.2
334,709 - H281DRAFT_01467 0.55 +2.8
334,764 + H281DRAFT_01467 0.61 +3.6
334,811 - H281DRAFT_01467 0.67 +0.4
335,145 - +1.1
335,556 + H281DRAFT_01468 0.34 +0.1
335,556 + H281DRAFT_01468 0.34 +0.0
335,557 - H281DRAFT_01468 0.34 +0.5
335,607 + H281DRAFT_01468 0.38 +0.2
335,671 - H281DRAFT_01468 0.43 +0.3
335,688 - H281DRAFT_01468 0.45 +1.8
335,688 - H281DRAFT_01468 0.45 -0.4
335,830 + H281DRAFT_01468 0.57 -0.4
335,898 + H281DRAFT_01468 0.62 +0.2

Or see this region's nucleotide sequence