Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00746

Experiment: 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00744 and H281DRAFT_00745 are separated by 174 nucleotidesH281DRAFT_00745 and H281DRAFT_00746 are separated by 9 nucleotidesH281DRAFT_00746 and H281DRAFT_00747 are separated by 285 nucleotidesH281DRAFT_00747 and H281DRAFT_00748 are separated by 280 nucleotides H281DRAFT_00744: H281DRAFT_00744 - arginine-tRNA-protein transferase, at 840,681 to 841,502 _00744 H281DRAFT_00745: H281DRAFT_00745 - leucyl/phenylalanyl-tRNA--protein transferase, at 841,677 to 842,414 _00745 H281DRAFT_00746: H281DRAFT_00746 - ADP-ribose pyrophosphatase YjhB, NUDIX family, at 842,424 to 842,969 _00746 H281DRAFT_00747: H281DRAFT_00747 - tRNA_Met_CAT, at 843,255 to 843,331 _00747 H281DRAFT_00748: H281DRAFT_00748 - Uncharacterized protein, UPF0303 family, at 843,612 to 844,154 _00748 Position (kb) 842 843Strain fitness (log2 ratio) -2 -1 0 1 2at 841.836 kb on + strand, within H281DRAFT_00745at 841.836 kb on + strand, within H281DRAFT_00745at 841.837 kb on - strand, within H281DRAFT_00745at 841.837 kb on - strand, within H281DRAFT_00745at 841.837 kb on - strand, within H281DRAFT_00745at 841.846 kb on - strand, within H281DRAFT_00745at 841.958 kb on - strand, within H281DRAFT_00745at 841.958 kb on - strand, within H281DRAFT_00745at 842.043 kb on + strand, within H281DRAFT_00745at 842.043 kb on + strand, within H281DRAFT_00745at 842.043 kb on + strand, within H281DRAFT_00745at 842.054 kb on + strand, within H281DRAFT_00745at 842.287 kb on + strand, within H281DRAFT_00745at 842.460 kb on - strandat 842.626 kb on + strand, within H281DRAFT_00746at 842.626 kb on + strandat 842.683 kb on - strand, within H281DRAFT_00746at 842.811 kb on + strand, within H281DRAFT_00746at 842.811 kb on + strand, within H281DRAFT_00746at 842.870 kb on - strand, within H281DRAFT_00746at 842.895 kb on + strand, within H281DRAFT_00746at 842.970 kb on - strandat 842.993 kb on + strandat 842.994 kb on - strandat 842.994 kb on - strandat 843.097 kb on - strandat 843.097 kb on - strandat 843.108 kb on - strandat 843.280 kb on + strand, within H281DRAFT_00747at 843.281 kb on - strand, within H281DRAFT_00747at 843.281 kb on - strand, within H281DRAFT_00747at 843.295 kb on - strand, within H281DRAFT_00747at 843.376 kb on + strandat 843.397 kb on - strandat 843.520 kb on - strandat 843.566 kb on + strandat 843.753 kb on + strand, within H281DRAFT_00748

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
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841,836 + H281DRAFT_00745 0.22 -0.5
841,836 + H281DRAFT_00745 0.22 -0.3
841,837 - H281DRAFT_00745 0.22 +0.5
841,837 - H281DRAFT_00745 0.22 +2.3
841,837 - H281DRAFT_00745 0.22 +0.7
841,846 - H281DRAFT_00745 0.23 -0.4
841,958 - H281DRAFT_00745 0.38 -0.1
841,958 - H281DRAFT_00745 0.38 +0.5
842,043 + H281DRAFT_00745 0.50 +0.7
842,043 + H281DRAFT_00745 0.50 +1.2
842,043 + H281DRAFT_00745 0.50 -0.1
842,054 + H281DRAFT_00745 0.51 +0.7
842,287 + H281DRAFT_00745 0.83 +1.1
842,460 - -1.7
842,626 + H281DRAFT_00746 0.37 -1.5
842,626 + -0.3
842,683 - H281DRAFT_00746 0.47 -1.3
842,811 + H281DRAFT_00746 0.71 -1.2
842,811 + H281DRAFT_00746 0.71 -0.7
842,870 - H281DRAFT_00746 0.82 -2.5
842,895 + H281DRAFT_00746 0.86 -0.7
842,970 - +0.4
842,993 + -1.6
842,994 - +0.1
842,994 - +0.9
843,097 - +0.2
843,097 - +0.2
843,108 - -1.1
843,280 + H281DRAFT_00747 0.32 -2.1
843,281 - H281DRAFT_00747 0.34 -1.4
843,281 - H281DRAFT_00747 0.34 -1.2
843,295 - H281DRAFT_00747 0.52 -0.4
843,376 + -0.5
843,397 - -0.5
843,520 - +0.2
843,566 + -0.0
843,753 + H281DRAFT_00748 0.26 +1.1

Or see this region's nucleotide sequence