Experiment: acetate 34 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21595 and AO353_21600 are separated by 231 nucleotides AO353_21600 and AO353_21605 are separated by 188 nucleotides
AO353_21595: AO353_21595 - serine/threonine protein kinase, at 4,729,071 to 4,730,351
_21595
AO353_21600: AO353_21600 - hypothetical protein, at 4,730,583 to 4,732,247
_21600
AO353_21605: AO353_21605 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, at 4,732,436 to 4,735,036
_21605
Position (kb)
4730
4731
4732
4733 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4729.944 kb on + strand, within AO353_21595 at 4729.944 kb on + strand, within AO353_21595 at 4729.945 kb on - strand, within AO353_21595 at 4730.034 kb on + strand, within AO353_21595 at 4730.034 kb on + strand, within AO353_21595 at 4730.034 kb on + strand at 4730.034 kb on + strand, within AO353_21595 at 4730.034 kb on + strand, within AO353_21595 at 4730.111 kb on + strand, within AO353_21595 at 4730.111 kb on + strand, within AO353_21595 at 4730.112 kb on - strand, within AO353_21595 at 4730.235 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.379 kb on + strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.380 kb on - strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.381 kb on + strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.382 kb on - strand at 4730.605 kb on + strand at 4730.606 kb on - strand at 4730.633 kb on + strand at 4730.709 kb on - strand at 4730.709 kb on - strand at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.872 kb on + strand, within AO353_21600 at 4730.873 kb on - strand, within AO353_21600 at 4730.899 kb on + strand, within AO353_21600 at 4730.900 kb on - strand, within AO353_21600 at 4730.923 kb on + strand, within AO353_21600 at 4730.978 kb on - strand, within AO353_21600 at 4730.980 kb on + strand, within AO353_21600 at 4731.020 kb on + strand, within AO353_21600 at 4731.021 kb on - strand, within AO353_21600 at 4731.037 kb on + strand, within AO353_21600 at 4731.247 kb on - strand, within AO353_21600 at 4731.314 kb on + strand, within AO353_21600 at 4731.367 kb on - strand, within AO353_21600 at 4731.505 kb on - strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.608 kb on + strand, within AO353_21600 at 4731.608 kb on + strand, within AO353_21600 at 4731.608 kb on + strand, within AO353_21600 at 4731.609 kb on - strand, within AO353_21600 at 4731.693 kb on + strand, within AO353_21600 at 4731.751 kb on + strand, within AO353_21600 at 4732.233 kb on - strand at 4732.233 kb on - strand at 4732.245 kb on + strand at 4732.245 kb on + strand at 4732.245 kb on + strand at 4732.280 kb on + strand at 4732.281 kb on - strand at 4732.362 kb on - strand at 4732.389 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate 34 mM remove 4,729,944 + AO353_21595 0.68 +0.2 4,729,944 + AO353_21595 0.68 +0.8 4,729,945 - AO353_21595 0.68 +0.1 4,730,034 + AO353_21595 0.75 +0.1 4,730,034 + AO353_21595 0.75 -0.2 4,730,034 + +0.8 4,730,034 + AO353_21595 0.75 +1.2 4,730,034 + AO353_21595 0.75 -0.3 4,730,111 + AO353_21595 0.81 -0.0 4,730,111 + AO353_21595 0.81 +1.8 4,730,112 - AO353_21595 0.81 -0.8 4,730,235 + -1.3 4,730,379 + -0.8 4,730,379 + -0.8 4,730,379 + +0.1 4,730,379 + -0.2 4,730,379 + -1.5 4,730,379 + +1.8 4,730,379 + -0.3 4,730,379 + -1.4 4,730,379 + +0.8 4,730,379 + -0.5 4,730,380 - +1.4 4,730,380 - +1.4 4,730,380 - -0.5 4,730,380 - -0.8 4,730,380 - +1.8 4,730,380 - +0.8 4,730,380 - +0.2 4,730,380 - +0.8 4,730,380 - -0.9 4,730,381 + +2.4 4,730,381 + +0.8 4,730,381 + -0.7 4,730,381 + -0.6 4,730,381 + -0.5 4,730,381 + +1.0 4,730,381 + -0.0 4,730,381 + -1.8 4,730,381 + +0.6 4,730,381 + +0.4 4,730,381 + -1.2 4,730,381 + +1.4 4,730,381 + +0.2 4,730,381 + +0.6 4,730,381 + -0.2 4,730,381 + +0.5 4,730,381 + -2.4 4,730,382 - +0.8 4,730,382 - -0.1 4,730,382 - +0.9 4,730,382 - -1.8 4,730,382 - -2.4 4,730,382 - +0.5 4,730,382 - +0.8 4,730,382 - +0.5 4,730,382 - +0.3 4,730,382 - +1.1 4,730,605 + -0.8 4,730,606 - -2.0 4,730,633 + -1.5 4,730,709 - -0.2 4,730,709 - +0.5 4,730,872 + AO353_21600 0.17 -0.7 4,730,872 + AO353_21600 0.17 -0.3 4,730,872 + AO353_21600 0.17 -1.2 4,730,872 + AO353_21600 0.17 -1.3 4,730,872 + AO353_21600 0.17 +0.8 4,730,873 - AO353_21600 0.17 +0.8 4,730,899 + AO353_21600 0.19 -0.2 4,730,900 - AO353_21600 0.19 +0.8 4,730,923 + AO353_21600 0.20 +0.8 4,730,978 - AO353_21600 0.24 +0.2 4,730,980 + AO353_21600 0.24 +0.5 4,731,020 + AO353_21600 0.26 -1.2 4,731,021 - AO353_21600 0.26 +0.8 4,731,037 + AO353_21600 0.27 +1.3 4,731,247 - AO353_21600 0.40 -1.2 4,731,314 + AO353_21600 0.44 +1.0 4,731,367 - AO353_21600 0.47 -0.2 4,731,505 - AO353_21600 0.55 +0.7 4,731,606 + AO353_21600 0.61 +1.0 4,731,606 + AO353_21600 0.61 -0.2 4,731,606 + AO353_21600 0.61 -0.5 4,731,606 + AO353_21600 0.61 +1.5 4,731,607 - AO353_21600 0.62 -0.2 4,731,607 - AO353_21600 0.62 -0.9 4,731,607 - AO353_21600 0.62 -1.5 4,731,607 - AO353_21600 0.62 +0.8 4,731,607 - AO353_21600 0.62 -0.2 4,731,608 + AO353_21600 0.62 +0.3 4,731,608 + AO353_21600 0.62 -0.8 4,731,608 + AO353_21600 0.62 +1.6 4,731,609 - AO353_21600 0.62 -0.8 4,731,693 + AO353_21600 0.67 -0.8 4,731,751 + AO353_21600 0.70 +0.2 4,732,233 - -0.6 4,732,233 - -0.2 4,732,245 + +1.5 4,732,245 + -1.2 4,732,245 + -0.2 4,732,280 + +0.8 4,732,281 - -0.3 4,732,362 - -1.8 4,732,389 - -0.5
Or see this region's nucleotide sequence