Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11550

Experiment: acetate 34 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 34 mM
2,551,997	+				+0.8
2,551,997	+				+0.3
2,551,997	+				+0.2
2,551,997	+				+2.2
2,551,997	+				+1.0
2,551,997	+				-0.3
2,551,998	-				-1.0
2,551,998	-				-0.8
2,551,998	-				+0.5
2,551,998	-				+1.8
2,551,998	-				-0.2
2,551,998	-				+0.5
2,551,998	-				+1.1
2,551,998	-				-0.5
2,552,009	+				+1.0
2,552,010	-				-1.0
2,552,019	+				+0.5
2,552,019	+				+0.8
2,552,019	+				+0.8
2,552,019	+				-0.2
2,552,019	+				+0.0
2,552,020	-				+2.9
2,552,020	-				-1.7
2,552,020	-				+1.6
2,552,020	-				+1.7
2,552,020	-				+1.3
2,552,020	-				-2.4
2,552,020	-				+0.6
2,552,058	+				-0.7
2,552,058	+				+0.9
2,552,059	-				+0.5
2,552,059	-				+2.1
2,552,082	+				+2.2
2,552,082	+				-1.1
2,552,082	+				-0.3
2,552,082	+				+1.3
2,552,082	+				+0.0
2,552,083	-				-1.2
2,552,083	-				-1.1
2,552,083	-				+0.1
2,552,083	-				-0.8
2,552,083	-				-0.2
2,552,083	-				+2.3
2,552,083	-				-2.7
2,552,083	-				+1.8
2,552,083	-				-0.8
2,552,083	-				+0.0
2,552,083	-				-0.1
2,552,094	+				+0.7
2,552,094	+				+1.3
2,552,094	+				+2.6
2,552,094	+				+1.1
2,552,095	-				+2.9
2,552,095	-				+1.3
2,552,095	-				+2.7
2,552,095	-				+0.1
2,552,095	-				+1.3
2,552,095	-				-1.0
2,552,095	-				+0.3
2,552,095	-				+0.6
2,552,134	+				+1.7
2,552,135	-				+0.1
2,552,146	+				+0.9
2,552,146	+				-0.8
2,552,146	+				-0.3
2,552,146	+				-0.1
2,552,147	-				-0.2
2,552,147	-				+0.2
2,552,147	-				+0.3
2,552,147	-				+1.0
2,552,147	-				-0.2
2,552,168	+		AO353_11545	0.10	+0.9
2,552,168	+		AO353_11545	0.10	-1.2
2,552,168	+		AO353_11545	0.10	+0.3
2,552,168	+		AO353_11545	0.10	+2.7
2,552,168	+		AO353_11545	0.10	-0.2
2,552,169	-		AO353_11545	0.11	-1.2
2,552,169	-		AO353_11545	0.11	+0.9
2,552,169	-		AO353_11545	0.11	+0.9
2,552,169	-		AO353_11545	0.11	+0.9
2,552,284	+		AO353_11545	0.25	+0.5
2,552,284	+		AO353_11545	0.25	+0.6
2,552,285	-		AO353_11545	0.25	+0.6
2,552,341	+		AO353_11545	0.32	+0.2
2,552,341	+		AO353_11545	0.32	+0.6
2,552,342	-		AO353_11545	0.32	-0.1
2,552,342	-		AO353_11545	0.32	+0.9
2,552,342	-		AO353_11545	0.32	+1.7
2,552,342	-		AO353_11545	0.32	+1.3
2,552,434	+		AO353_11545	0.43	-0.4
2,552,435	-		AO353_11545	0.43	+1.0
2,552,435	-		AO353_11545	0.43	+0.7
2,552,435	-		AO353_11545	0.43	+0.1
2,552,491	+		AO353_11545	0.50	+1.9
2,552,492	-		AO353_11545	0.50	+0.8
2,552,638	+		AO353_11545	0.68	+0.3
2,552,638	+		AO353_11545	0.68	+2.3
2,552,639	-		AO353_11545	0.68	+0.2
2,552,639	-		AO353_11545	0.68	+0.3
2,552,639	-		AO353_11545	0.68	+0.6
2,552,798	-		AO353_11545	0.87	+2.6
2,552,798	-		AO353_11545	0.87	+0.5
2,552,803	+		AO353_11545	0.88	+0.9
2,552,803	+		AO353_11545	0.88	+0.7
2,552,804	-		AO353_11545	0.88	+0.2
2,552,804	-		AO353_11545	0.88	-0.4
2,552,814	+		AO353_11545	0.89	+1.1
2,552,929	+				+0.9
2,552,929	+				+2.6
2,553,206	+		AO353_11550	0.33	+1.3
2,553,206	+		AO353_11550	0.33	+0.4
2,553,206	+		AO353_11550	0.33	+0.6
2,553,206	+		AO353_11550	0.33	+1.3
2,553,206	+		AO353_11550	0.33	-0.8
2,553,207	-		AO353_11550	0.33	+0.5
2,553,207	-		AO353_11550	0.33	+0.1
2,553,207	-		AO353_11550	0.33	+1.3
2,553,207	-		AO353_11550	0.33	-0.9
2,553,207	-		AO353_11550	0.33	-0.7
2,553,287	+		AO353_11550	0.43	+0.4
2,553,287	+		AO353_11550	0.43	+1.1
2,553,287	+		AO353_11550	0.43	-0.1
2,553,287	+		AO353_11550	0.43	-1.4
2,553,287	+		AO353_11550	0.43	+1.0
2,553,288	-		AO353_11550	0.43	-0.0
2,553,288	-		AO353_11550	0.43	-0.4
2,553,288	-		AO353_11550	0.43	+0.8
2,553,288	-		AO353_11550	0.43	-0.8
2,553,288	-		AO353_11550	0.43	+0.6
2,553,408	+		AO353_11550	0.56	+1.3
2,553,408	+		AO353_11550	0.56	+1.6
2,553,409	-		AO353_11550	0.57	-2.5
2,553,409	-		AO353_11550	0.57	+1.5
2,553,539	+		AO353_11550	0.71	+0.7
2,553,539	+		AO353_11550	0.71	+0.2
2,553,539	+		AO353_11550	0.71	+0.9
2,553,540	-		AO353_11550	0.72	+1.8
2,553,653	+		AO353_11550	0.85	+0.8
2,553,654	-		AO353_11550	0.85	+0.6
2,553,654	-		AO353_11550	0.85	-0.2
2,553,654	-		AO353_11550	0.85	+0.1
2,553,654	-		AO353_11550	0.85	-0.1
2,553,662	+		AO353_11550	0.86	+0.6
2,553,662	+		AO353_11550	0.86	+2.1
2,553,662	+		AO353_11550	0.86	-1.5
2,553,662	+		AO353_11550	0.86	+1.0
2,553,662	+		AO353_11550	0.86	-0.7
2,553,662	+		AO353_11550	0.86	-0.7
2,553,662	+		AO353_11550	0.86	-0.9
2,553,662	+		AO353_11550	0.86	-0.3
2,553,662	+		AO353_11550	0.86	-1.8
2,553,663	-		AO353_11550	0.86	+1.3
2,553,663	-		AO353_11550	0.86	+0.0
2,553,663	-		AO353_11550	0.86	-0.0
2,553,663	-		AO353_11550	0.86	+2.3
2,553,751	+				+1.0
2,553,751	+				-2.0
2,553,752	-				-0.7
2,553,752	-				-0.1
2,553,752	-				+1.3
2,553,785	+				+1.3
2,553,785	+				+0.6
2,553,785	+				-0.9
2,553,785	+				+0.6
2,553,785	+				+0.3
2,553,785	+				+0.8
2,553,785	+				+0.3
2,553,785	+				-1.0
2,553,786	-				-0.2
2,553,786	-				-0.6
2,553,786	-				+0.7
2,553,786	-				+0.3
2,553,786	-				+0.6
2,553,786	-				-0.3
2,553,786	-				+0.5
2,553,786	-				+1.9
2,553,786	-				+1.3
2,553,786	-				+1.1
2,553,786	-				-0.5
2,553,786	-				-0.7
2,553,786	-				+1.3
2,553,786	-				+0.8
2,553,808	+				+1.0
2,554,026	+		AO353_11555	0.24	-0.2
2,554,026	+		AO353_11555	0.24	+1.0
2,554,027	-		AO353_11555	0.24	-1.0
2,554,027	-		AO353_11555	0.24	+0.9
2,554,027	-		AO353_11555	0.24	+0.1
2,554,027	-		AO353_11555	0.24	+0.3
2,554,027	-		AO353_11555	0.24	+1.0
2,554,027	-		AO353_11555	0.24	+2.1
2,554,027	-		AO353_11555	0.24	-0.5
2,554,037	+		AO353_11555	0.25	+1.1
2,554,038	-		AO353_11555	0.25	+0.8
2,554,038	-		AO353_11555	0.25	-1.2
2,554,069	+		AO353_11555	0.28	+1.3
2,554,307	-		AO353_11555	0.52	+1.0
2,554,345	+		AO353_11555	0.56	+0.3
2,554,345	+		AO353_11555	0.56	-0.8
2,554,346	-		AO353_11555	0.56	-0.6
2,554,346	-		AO353_11555	0.56	+0.8
2,554,346	-		AO353_11555	0.56	-0.6
2,554,346	-		AO353_11555	0.56	-0.9
2,554,346	-		AO353_11555	0.56	-0.1
2,554,346	-		AO353_11555	0.56	+0.3
2,554,463	+		AO353_11555	0.68	+0.4
2,554,490	+		AO353_11555	0.71	-0.7
2,554,491	-		AO353_11555	0.71	+1.2
2,554,608	+				+1.3
2,554,608	+				+1.3
2,554,608	+		AO353_11555	0.83	+0.5
2,554,608	+		AO353_11555	0.83	+1.9
2,554,608	+		AO353_11555	0.83	-0.2
2,554,608	+		AO353_11555	0.83	+0.0
2,554,609	-		AO353_11555	0.83	-0.5
2,554,609	-		AO353_11555	0.83	+1.6
2,554,609	-		AO353_11555	0.83	+0.0
2,554,609	-		AO353_11555	0.83	-0.0
2,554,609	-		AO353_11555	0.83	+0.0
2,554,689	+				+0.5
2,554,689	+				-2.7
2,554,689	+				-0.5
2,554,689	+				-0.7
2,554,689	+				-2.5
2,554,690	-				+1.3
2,554,690	-				+0.6
2,554,690	-				-1.7
2,554,690	-				-0.2
2,554,690	-				-0.8
2,554,690	-				+0.6
2,554,778	+				-0.5
2,554,778	+				+1.9
2,554,779	-				+2.1