Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4059

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,877,397	+		Shewana3_4058	0.54	-0.1
4,877,429	+		Shewana3_4058	0.56	+0.6
4,877,437	-		Shewana3_4058	0.56	-0.7
4,877,438	-		Shewana3_4058	0.57	-0.3
4,877,458	+		Shewana3_4058	0.58	+0.4
4,877,463	-		Shewana3_4058	0.58	-0.0
4,877,543	+		Shewana3_4058	0.63	+1.4
4,877,550	+		Shewana3_4058	0.64	+0.6
4,877,551	-		Shewana3_4058	0.64	-0.1
4,877,551	-		Shewana3_4058	0.64	+3.5
4,877,553	-		Shewana3_4058	0.64	+0.5
4,877,558	-		Shewana3_4058	0.64	+0.2
4,877,558	-		Shewana3_4058	0.64	+0.6
4,877,575	-		Shewana3_4058	0.66	-0.1
4,877,596	+		Shewana3_4058	0.67	+0.0
4,877,661	+		Shewana3_4058	0.71	-0.3
4,877,661	+		Shewana3_4058	0.71	+0.7
4,877,669	+		Shewana3_4058	0.72	+1.3
4,877,679	-		Shewana3_4058	0.72	-0.1
4,877,690	-		Shewana3_4058	0.73	-1.1
4,877,745	+		Shewana3_4058	0.77	+0.9
4,877,755	+		Shewana3_4058	0.77	+1.0
4,877,816	+		Shewana3_4058	0.81	-0.3
4,877,816	+		Shewana3_4058	0.81	+0.6
4,877,824	-		Shewana3_4058	0.82	-0.6
4,877,824	-		Shewana3_4058	0.82	-1.1
4,877,824	-		Shewana3_4058	0.82	+1.9
4,877,824	-		Shewana3_4058	0.82	+0.1
4,877,824	-		Shewana3_4058	0.82	+0.6
4,877,825	+		Shewana3_4058	0.82	-0.0
4,877,825	-		Shewana3_4058	0.82	-0.8
4,877,830	+		Shewana3_4058	0.82	-0.1
4,877,830	+		Shewana3_4058	0.82	+0.2
4,877,830	+		Shewana3_4058	0.82	+0.4
4,877,830	+		Shewana3_4058	0.82	+1.2
4,877,830	+		Shewana3_4058	0.82	+0.3
4,877,830	+		Shewana3_4058	0.82	-0.2
4,877,830	+		Shewana3_4058	0.82	-0.9
4,877,830	+		Shewana3_4058	0.82	-0.6
4,877,838	-		Shewana3_4058	0.83	+0.3
4,877,838	-		Shewana3_4058	0.83	-0.2
4,877,838	-		Shewana3_4058	0.83	+0.6
4,877,838	-		Shewana3_4058	0.83	-0.3
4,877,838	-		Shewana3_4058	0.83	-0.2
4,877,838	-		Shewana3_4058	0.83	-0.2
4,877,838	-		Shewana3_4058	0.83	-0.1
4,877,838	-		Shewana3_4058	0.83	+0.6
4,877,838	-		Shewana3_4058	0.83	-1.9
4,877,838	-		Shewana3_4058	0.83	-1.0
4,877,838	-		Shewana3_4058	0.83	-0.3
4,877,838	-		Shewana3_4058	0.83	-0.3
4,877,840	+		Shewana3_4058	0.83	+0.4
4,877,866	-		Shewana3_4058	0.85	-1.6
4,877,868	-		Shewana3_4058	0.85	-0.6
4,877,869	-		Shewana3_4058	0.85	-0.1
4,877,883	-		Shewana3_4058	0.86	+0.0
4,877,884	-		Shewana3_4058	0.86	-0.1
4,877,900	+		Shewana3_4058	0.87	-0.8
4,877,910	+		Shewana3_4058	0.88	-0.9
4,877,910	+		Shewana3_4058	0.88	+0.3
4,877,965	+				+0.1
4,878,052	-				-0.4
4,878,142	+				-0.2
4,878,150	-				-0.1
4,878,152	+				-0.2
4,878,165	-				+0.2
4,878,198	+				-0.1
4,878,204	-				-0.0
4,878,206	-				-0.3
4,878,206	-				-0.3
4,878,271	-				-0.1
4,878,344	+				+0.5
4,878,346	-				-0.3
4,878,381	-				-0.1
4,878,391	+				+0.5
4,878,391	+				-0.4
4,878,399	-				-0.1
4,878,525	-		Shewana3_4059	0.12	-0.3
4,878,636	-		Shewana3_4059	0.19	+0.1
4,878,772	-		Shewana3_4059	0.28	-0.5
4,878,806	-		Shewana3_4059	0.30	+0.6
4,878,827	+		Shewana3_4059	0.32	-0.8
4,878,991	+		Shewana3_4059	0.42	-0.3
4,878,991	+		Shewana3_4059	0.42	-0.0
4,878,991	+		Shewana3_4059	0.42	-0.3
4,878,999	-		Shewana3_4059	0.43	-0.5
4,879,071	+		Shewana3_4059	0.48	-0.6
4,879,141	-		Shewana3_4059	0.52	-0.5
4,879,151	+		Shewana3_4059	0.53	-0.3
4,879,284	-		Shewana3_4059	0.62	-0.1
4,879,373	+		Shewana3_4059	0.67	+0.5
4,879,601	-		Shewana3_4059	0.82	-0.6
4,879,856	+				-0.1
4,879,955	+				-0.2
4,879,979	+				-0.7
4,879,979	+				+0.0
4,879,979	+				-0.0
4,879,981	+				+0.1
4,880,065	+				-0.6
4,880,067	+				+0.5
4,880,072	+				-0.4
4,880,080	-				-0.8
4,880,231	+		Shewana3_4060	0.26	-0.2
4,880,260	+		Shewana3_4060	0.32	-0.2
4,880,353	+		Shewana3_4060	0.48	-0.4
4,880,387	-		Shewana3_4060	0.54	+0.4
4,880,396	-		Shewana3_4060	0.56	+0.1
4,880,435	-		Shewana3_4060	0.63	-0.4
4,880,435	-		Shewana3_4060	0.63	+0.1
4,880,435	-		Shewana3_4060	0.63	+0.1