Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4013

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,816,490	-		Shewana3_4012	0.62	+0.5
4,816,496	+		Shewana3_4012	0.62	+2.0
4,816,496	+		Shewana3_4012	0.62	+1.1
4,816,504	+		Shewana3_4012	0.62	-0.9
4,816,504	-		Shewana3_4012	0.62	+0.6
4,816,512	-		Shewana3_4012	0.63	+0.5
4,816,512	-		Shewana3_4012	0.63	+0.1
4,816,512	-		Shewana3_4012	0.63	+0.7
4,816,512	-		Shewana3_4012	0.63	+0.8
4,816,512	-		Shewana3_4012	0.63	+0.2
4,816,512	-		Shewana3_4012	0.63	+0.4
4,816,512	-		Shewana3_4012	0.63	+0.3
4,816,583	+		Shewana3_4012	0.66	+0.1
4,816,770	+		Shewana3_4012	0.76	+0.0
4,816,775	+		Shewana3_4012	0.76	+0.9
4,816,912	+		Shewana3_4012	0.83	+0.0
4,816,919	+		Shewana3_4012	0.84	+0.4
4,816,944	-		Shewana3_4012	0.85	+0.8
4,817,120	+				+0.5
4,817,133	-				+0.6
4,817,134	-				+0.3
4,817,249	+				+0.7
4,817,274	+				+1.2
4,817,274	+				+0.4
4,817,499	+				+0.4
4,817,545	+				+1.4
4,817,553	-				-1.5
4,817,596	-				-1.0
4,817,739	+		Shewana3_4013	0.12	+1.4
4,817,822	+		Shewana3_4013	0.15	-2.4
4,817,867	+		Shewana3_4013	0.17	-0.9
4,817,875	-		Shewana3_4013	0.18	-1.9
4,817,893	+		Shewana3_4013	0.19	-2.1
4,818,054	-		Shewana3_4013	0.25	-1.9
4,818,074	+		Shewana3_4013	0.26	-0.8
4,818,167	-		Shewana3_4013	0.30	-1.8
4,818,260	-		Shewana3_4013	0.34	-1.4
4,818,321	-		Shewana3_4013	0.37	-2.3
4,818,338	-		Shewana3_4013	0.38	-2.2
4,818,592	-		Shewana3_4013	0.48	-1.9
4,818,659	+		Shewana3_4013	0.51	-3.5
4,818,803	+		Shewana3_4013	0.57	-1.5
4,818,889	-		Shewana3_4013	0.61	-1.4
4,818,987	-		Shewana3_4013	0.65	-2.2
4,818,987	-		Shewana3_4013	0.65	-2.1
4,818,989	-		Shewana3_4013	0.65	-1.9
4,818,992	+		Shewana3_4013	0.65	-2.1
4,819,000	-		Shewana3_4013	0.66	-2.1
4,819,056	+		Shewana3_4013	0.68	-2.5
4,819,056	+		Shewana3_4013	0.68	-2.2
4,819,064	-		Shewana3_4013	0.69	-2.0
4,819,235	+		Shewana3_4013	0.76	-2.3
4,819,253	-		Shewana3_4013	0.77	-0.1
4,819,488	-		Shewana3_4013	0.87	-1.8
4,819,621	-				-1.5
4,819,632	+				-2.0
4,819,658	+				-1.4
4,819,679	+				+1.4
4,819,706	+				+1.4
4,819,928	-				+0.7
4,820,024	+		Shewana3_4014	0.19	+0.1
4,820,054	-		Shewana3_4014	0.25	-0.1
4,820,583	+				-0.0
4,820,693	+		Shewana3_4015	0.21	+0.5
4,820,725	-		Shewana3_4015	0.25	+0.2
4,820,735	-		Shewana3_4015	0.26	-0.4