Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3901
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,680,968 | - | -0.4 | |||
4,681,212 | + | -0.4 | |||
4,681,234 | - | Shewana3_3901 | 0.11 | -0.4 | |
4,681,236 | + | Shewana3_3901 | 0.11 | +0.9 | |
4,681,783 | + | Shewana3_3901 | 0.51 | -0.1 | |
4,681,829 | - | Shewana3_3901 | 0.54 | -0.3 | |
4,681,920 | - | Shewana3_3901 | 0.61 | -0.2 | |
4,682,256 | + | Shewana3_3901 | 0.85 | -0.7 | |
4,682,359 | - | -0.2 | |||
4,682,385 | + | +0.2 | |||
4,682,412 | + | +0.1 | |||
4,682,455 | + | +1.7 | |||
4,682,475 | + | +0.2 | |||
4,682,576 | - | +3.9 | |||
4,682,761 | - | Shewana3_3902 | 0.17 | +0.4 | |
4,682,990 | + | Shewana3_3902 | 0.36 | +0.2 | |
4,683,066 | + | Shewana3_3902 | 0.42 | -1.4 | |
4,683,079 | - | Shewana3_3902 | 0.43 | -0.1 | |
4,683,143 | - | Shewana3_3902 | 0.49 | -0.1 | |
4,683,273 | - | Shewana3_3902 | 0.59 | +0.1 | |
4,683,394 | + | Shewana3_3902 | 0.69 | +0.1 | |
4,683,404 | + | Shewana3_3902 | 0.70 | -2.4 |
Or see this region's nucleotide sequence