Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3866

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,641,907	+		Shewana3_3865	0.14	+1.3
4,641,912	+		Shewana3_3865	0.14	+2.5
4,641,912	+		Shewana3_3865	0.14	+1.1
4,641,915	-		Shewana3_3865	0.15	+0.7
4,642,054	-		Shewana3_3865	0.28	+1.4
4,642,058	-		Shewana3_3865	0.28	+0.9
4,642,126	+		Shewana3_3865	0.35	+1.3
4,642,269	-		Shewana3_3865	0.49	+1.1
4,642,325	+		Shewana3_3865	0.54	+1.1
4,642,346	-		Shewana3_3865	0.56	+1.1
4,642,505	-		Shewana3_3865	0.71	+0.9
4,642,505	-		Shewana3_3865	0.71	+1.1
4,642,548	-		Shewana3_3865	0.76	+0.5
4,642,728	-				+0.6
4,642,800	+				+1.4
4,642,825	-				+0.5
4,642,825	-				+0.0
4,642,919	+				+0.9
4,642,935	-				-0.1
4,642,941	-				-0.5
4,642,964	+		Shewana3_3866	0.12	+0.3
4,643,130	-		Shewana3_3866	0.23	+0.0
4,643,349	-		Shewana3_3866	0.39	+0.2
4,643,593	+		Shewana3_3866	0.57	-0.2
4,643,601	-		Shewana3_3866	0.57	-1.1
4,643,601	-		Shewana3_3866	0.57	-0.6
4,643,601	-		Shewana3_3866	0.57	-0.6
4,643,672	-		Shewana3_3866	0.62	-0.5
4,643,674	+		Shewana3_3866	0.62	-0.1
4,643,795	+		Shewana3_3866	0.71	+0.1
4,643,881	-		Shewana3_3866	0.77	-0.2
4,643,899	-		Shewana3_3866	0.78	+0.2
4,643,934	-		Shewana3_3866	0.81	+0.2
4,644,053	+		Shewana3_3866	0.89	-0.3
4,644,061	-				-0.4
4,644,123	-				-0.2
4,644,215	-				+0.6
4,644,382	+				+0.1
4,644,382	+				+1.3
4,644,390	-				-0.4
4,644,400	-				-0.5
4,644,462	+		Shewana3_3867	0.24	+0.1
4,644,465	-		Shewana3_3867	0.25	-0.2
4,644,469	+		Shewana3_3867	0.26	+0.6
4,644,645	-		Shewana3_3867	0.76	+0.0
4,644,765	+				-0.1
4,644,773	-				-2.0
4,644,773	-				-0.1
4,644,899	-		Shewana3_3868	0.18	-0.4
4,644,911	-		Shewana3_3868	0.20	+0.0
4,645,045	+		Shewana3_3868	0.38	-0.2
4,645,053	-		Shewana3_3868	0.39	+0.1
4,645,053	-		Shewana3_3868	0.39	+0.6
4,645,063	-		Shewana3_3868	0.40	-0.0
4,645,154	+		Shewana3_3868	0.52	-0.3
4,645,154	+		Shewana3_3868	0.52	-0.0
4,645,164	+		Shewana3_3868	0.53	-0.4
4,645,167	-		Shewana3_3868	0.54	-0.2
4,645,172	-		Shewana3_3868	0.54	-0.0
4,645,179	-		Shewana3_3868	0.55	-0.4