Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3782

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,541,216	+		Shewana3_3780	0.78	-0.2
4,541,216	+		Shewana3_3780	0.78	-0.4
4,541,216	+		Shewana3_3780	0.78	+0.2
4,541,224	-		Shewana3_3780	0.79	+2.3
4,541,225	+		Shewana3_3780	0.79	+0.3
4,541,283	+		Shewana3_3780	0.86	+0.1
4,541,291	-		Shewana3_3780	0.87	-0.3
4,541,291	-		Shewana3_3780	0.87	+0.3
4,541,327	-				-1.5
4,541,347	-				+1.3
4,541,437	-				+0.5
4,541,486	+				-0.1
4,541,498	+				+0.3
4,541,515	-				+0.3
4,541,611	-		Shewana3_3781	0.47	+0.4
4,541,638	+		Shewana3_3781	0.59	-0.1
4,541,646	-		Shewana3_3781	0.62	+0.0
4,541,646	-		Shewana3_3781	0.62	-0.1
4,541,725	+				+0.2
4,541,830	+				+3.9
4,541,830	+				+0.1
4,541,830	+				-0.6
4,541,830	+				-0.1
4,541,830	+				+0.0
4,541,838	-				+0.2
4,541,838	-				-0.1
4,541,838	-				+0.4
4,541,838	-				-0.5
4,541,862	+				-0.2
4,541,886	-				-0.8
4,541,912	-				+0.3
4,541,914	+				-0.1
4,542,012	-				-0.3
4,542,020	-				-0.3
4,542,044	+				-0.1
4,542,044	+				-0.2
4,542,044	+				+0.1
4,542,044	+				-0.1
4,542,044	+				-0.5
4,542,052	-				-0.0
4,542,052	-				+0.1
4,542,052	-				-0.1
4,542,052	-				-0.2
4,542,075	-				-0.6
4,542,088	-				-0.1
4,542,113	+				-0.1
4,542,190	-				-1.1
4,542,198	+				-0.0
4,542,229	+				+2.3
4,542,229	+				-0.0
4,542,288	+		Shewana3_3782	0.16	+0.0
4,542,311	-		Shewana3_3782	0.18	+0.6
4,542,342	+		Shewana3_3782	0.22	-0.5
4,542,345	+		Shewana3_3782	0.23	+0.6
4,542,390	+		Shewana3_3782	0.28	-0.7
4,542,445	-		Shewana3_3782	0.35	-0.0
4,542,482	+		Shewana3_3782	0.39	-0.2
4,542,482	+		Shewana3_3782	0.39	+0.0
4,542,482	+		Shewana3_3782	0.39	+0.5
4,542,482	+		Shewana3_3782	0.39	-1.8
4,542,484	+		Shewana3_3782	0.40	-0.4
4,542,490	-		Shewana3_3782	0.40	+0.0
4,542,490	-		Shewana3_3782	0.40	-0.1
4,542,490	-		Shewana3_3782	0.40	-0.4
4,542,523	+		Shewana3_3782	0.44	-1.4
4,542,617	-		Shewana3_3782	0.56	+0.0
4,542,653	-		Shewana3_3782	0.60	-0.0
4,542,730	+		Shewana3_3782	0.70	+0.4
4,542,752	-		Shewana3_3782	0.72	+0.7
4,542,802	-		Shewana3_3782	0.78	-0.2
4,542,811	+		Shewana3_3782	0.79	-0.2
4,542,821	+		Shewana3_3782	0.81	+0.1
4,542,821	+		Shewana3_3782	0.81	+0.3
4,542,829	-		Shewana3_3782	0.82	-0.0
4,542,829	-		Shewana3_3782	0.82	+0.1
4,542,963	+				+0.0
4,542,972	+				-0.5
4,542,972	+				+0.4
4,542,972	+				-0.5
4,542,980	-				+0.0
4,543,106	-				+0.1
4,543,108	-				-0.1
4,543,194	+				-0.3
4,543,256	-				-0.7
4,543,288	-		Shewana3_3783	0.14	+0.3
4,543,437	+		Shewana3_3783	0.37	+0.3
4,543,464	+		Shewana3_3783	0.41	+0.1
4,543,465	+		Shewana3_3783	0.41	+0.1
4,543,577	-		Shewana3_3783	0.59	+1.3
4,543,606	-		Shewana3_3783	0.63	-0.9
4,543,661	-		Shewana3_3783	0.71	+1.7
4,543,666	-		Shewana3_3783	0.72	+0.0
4,543,759	+		Shewana3_3783	0.86	+0.9
4,543,759	+		Shewana3_3783	0.86	+1.2
4,543,867	-				+0.2
4,543,867	-				+0.3
4,543,899	-				-0.7
4,543,913	-				+1.3
4,543,914	-				+0.3
4,543,940	-				+0.2