Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3345
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,013,466 | - | -0.7 | |||
4,013,901 | + | Shewana3_3344 | 0.57 | -0.1 | |
4,013,976 | + | Shewana3_3344 | 0.66 | -0.3 | |
4,014,008 | + | Shewana3_3344 | 0.70 | +0.2 | |
4,014,067 | + | Shewana3_3344 | 0.77 | -1.2 | |
4,014,067 | + | Shewana3_3344 | 0.77 | +0.5 | |
4,014,070 | - | Shewana3_3344 | 0.77 | +0.1 | |
4,014,075 | - | Shewana3_3344 | 0.78 | -0.1 | |
4,014,085 | + | Shewana3_3344 | 0.79 | -0.1 | |
4,014,242 | - | +0.2 | |||
4,014,288 | + | +0.5 | |||
4,014,311 | + | -0.0 | |||
4,014,311 | + | +0.6 | |||
4,014,357 | - | Shewana3_3345 | 0.17 | +0.1 | |
4,014,393 | + | Shewana3_3345 | 0.24 | -0.6 | |
4,014,415 | - | Shewana3_3345 | 0.28 | +0.8 | |
4,014,566 | - | Shewana3_3345 | 0.57 | -0.6 | |
4,014,920 | + | Shewana3_3346 | 0.11 | -0.4 | |
4,015,132 | + | Shewana3_3346 | 0.49 | -0.3 | |
4,015,151 | + | Shewana3_3346 | 0.53 | +2.4 | |
4,015,327 | - | Shewana3_3346 | 0.85 | +0.5 | |
4,015,589 | + | Shewana3_3347 | 0.25 | +0.1 | |
4,015,601 | + | Shewana3_3347 | 0.27 | +0.6 | |
4,015,756 | - | Shewana3_3347 | 0.47 | +0.3 |
Or see this region's nucleotide sequence