Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3191

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
3,828,239	+				+0.1
3,828,247	-				-0.8
3,828,324	+				-0.2
3,828,324	+				-0.3
3,828,324	+				-1.1
3,828,332	-				+0.1
3,828,332	-				-0.6
3,828,603	-		Shewana3_3190	0.40	-0.6
3,828,695	+		Shewana3_3190	0.51	+4.2
3,828,695	+		Shewana3_3190	0.51	-0.3
3,828,703	-		Shewana3_3190	0.52	+0.1
3,828,802	+		Shewana3_3190	0.63	-0.5
3,828,804	+		Shewana3_3190	0.64	+0.3
3,828,861	-		Shewana3_3190	0.70	-0.4
3,828,884	-		Shewana3_3190	0.73	-1.3
3,828,886	+		Shewana3_3190	0.73	-0.6
3,828,908	-		Shewana3_3190	0.76	-0.6
3,828,908	-		Shewana3_3190	0.76	+1.0
3,828,944	+		Shewana3_3190	0.80	-1.3
3,828,952	-		Shewana3_3190	0.81	-0.6
3,829,077	-				-1.0
3,829,311	+		Shewana3_3191	0.22	+0.5
3,829,689	+		Shewana3_3191	0.65	-0.3
3,829,770	-		Shewana3_3191	0.75	+0.0
3,829,783	-		Shewana3_3191	0.76	+1.0
3,829,852	+		Shewana3_3191	0.84	+0.6
3,829,875	+		Shewana3_3191	0.87	+1.5
3,829,889	-		Shewana3_3191	0.88	-0.6
3,829,920	+				-0.4
3,829,921	-				+1.0
3,829,966	-				-1.6
3,829,983	-				+1.0
3,830,076	-				+2.0
3,830,374	+		Shewana3_3192	0.34	-0.0
3,830,377	-		Shewana3_3192	0.34	-0.6
3,830,379	+		Shewana3_3192	0.35	-2.1
3,830,379	+		Shewana3_3192	0.35	-0.4
3,830,379	+		Shewana3_3192	0.35	-0.4
3,830,379	+		Shewana3_3192	0.35	-1.1
3,830,384	+		Shewana3_3192	0.35	-0.5
3,830,384	+		Shewana3_3192	0.35	+0.5
3,830,387	-		Shewana3_3192	0.35	-0.4
3,830,402	-		Shewana3_3192	0.37	-0.5
3,830,413	-		Shewana3_3192	0.38	-1.1
3,830,428	+		Shewana3_3192	0.39	-0.5
3,830,567	+		Shewana3_3192	0.51	-0.6
3,830,584	+		Shewana3_3192	0.53	-1.0
3,830,584	+		Shewana3_3192	0.53	-0.4
3,830,592	-		Shewana3_3192	0.53	+0.6
3,830,637	+		Shewana3_3192	0.57	-0.8
3,830,645	-		Shewana3_3192	0.58	+0.4
3,830,670	-		Shewana3_3192	0.60	+0.4
3,830,894	+		Shewana3_3192	0.80	-0.5
3,830,912	+		Shewana3_3192	0.82	-1.3