Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2838

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
3,383,089	-		Shewana3_2836	0.79	-0.3
3,383,293	-				-2.1
3,383,528	+		Shewana3_2837	0.42	+0.9
3,383,572	-		Shewana3_2837	0.51	-0.5
3,383,639	-		Shewana3_2837	0.64	-0.3
3,383,728	+		Shewana3_2837	0.81	-0.4
3,383,728	+		Shewana3_2837	0.81	-0.7
3,383,736	-		Shewana3_2837	0.82	+0.5
3,384,034	-				+0.6
3,384,061	+				-0.3
3,384,061	+				+1.2
3,384,069	-				+0.9
3,384,075	-				+0.9
3,384,170	+				-0.7
3,384,196	-		Shewana3_2838	0.11	+0.3
3,384,341	+		Shewana3_2838	0.25	-2.3
3,384,359	-		Shewana3_2838	0.27	-0.1
3,384,403	-		Shewana3_2838	0.32	-1.4
3,384,412	-		Shewana3_2838	0.33	+0.9
3,384,431	+		Shewana3_2838	0.34	-0.1
3,384,437	+		Shewana3_2838	0.35	-0.1
3,384,492	+		Shewana3_2838	0.41	-0.1
3,384,509	-		Shewana3_2838	0.42	-1.4
3,384,546	-		Shewana3_2838	0.46	-2.4
3,384,771	+		Shewana3_2838	0.68	-0.1
3,384,772	-		Shewana3_2838	0.69	-2.9
3,384,808	-		Shewana3_2838	0.72	-3.4
3,384,940	-		Shewana3_2838	0.85	-1.1
3,384,940	-		Shewana3_2838	0.85	+0.9
3,384,988	+				+0.9
3,385,120	+				-0.1
3,385,120	+				-0.7
3,385,120	+				+0.9
3,385,120	+				+0.9
3,385,135	+				-1.0
3,385,143	-				-2.1
3,385,402	+				-2.1
3,385,410	-				+1.9
3,385,578	+		Shewana3_2839	0.13	-0.1
3,385,717	+		Shewana3_2839	0.29	+0.9
3,385,725	-		Shewana3_2839	0.30	-0.5
3,385,728	+		Shewana3_2839	0.30	+0.9
3,385,736	-		Shewana3_2839	0.31	+0.9
3,385,798	+		Shewana3_2839	0.38	-2.1
3,385,798	+		Shewana3_2839	0.38	-0.4
3,385,806	-		Shewana3_2839	0.39	+0.9
3,385,806	-		Shewana3_2839	0.39	-1.1
3,385,806	-		Shewana3_2839	0.39	+0.9
3,385,844	+		Shewana3_2839	0.43	+0.9
3,385,963	-		Shewana3_2839	0.57	+0.9
3,385,963	-		Shewana3_2839	0.57	-0.1
3,385,963	-		Shewana3_2839	0.57	-0.1
3,386,051	-		Shewana3_2839	0.67	-1.1