Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2049
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,456,135 | - | Shewana3_2048 | 0.31 | -0.0 | |
| 2,456,364 | + | Shewana3_2048 | 0.51 | +0.7 | |
| 2,456,672 | - | Shewana3_2048 | 0.79 | +0.7 | |
| 2,456,692 | - | Shewana3_2048 | 0.80 | +0.7 | |
| 2,456,993 | + | -1.3 | |||
| 2,457,004 | - | -0.9 | |||
| 2,457,004 | - | -0.9 | |||
| 2,457,191 | + | Shewana3_2049 | 0.20 | -1.0 | |
| 2,457,191 | + | Shewana3_2049 | 0.20 | -0.4 | |
| 2,457,199 | - | Shewana3_2049 | 0.21 | +0.7 | |
| 2,457,219 | - | Shewana3_2049 | 0.25 | +0.7 | |
| 2,457,365 | + | Shewana3_2049 | 0.54 | -0.8 | |
| 2,457,378 | + | Shewana3_2049 | 0.57 | -1.2 | |
| 2,458,576 | + | Shewana3_2050 | 0.24 | +0.7 |
Or see this region's nucleotide sequence