Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1898
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,254,040 | + | -1.3 | |||
2,254,258 | - | +0.7 | |||
2,254,594 | + | +0.7 | |||
2,254,663 | - | +1.2 | |||
2,254,901 | + | +0.7 | |||
2,254,901 | + | +0.6 | |||
2,254,964 | + | +1.3 | |||
2,255,067 | - | Shewana3_1898 | 0.38 | +0.7 | |
2,255,081 | + | Shewana3_1898 | 0.47 | +0.9 | |
2,255,081 | + | Shewana3_1898 | 0.47 | +1.4 | |
2,255,315 | + | Shewana3_1899 | 0.41 | +0.7 | |
2,255,575 | - | +0.7 | |||
2,255,575 | - | +0.7 | |||
2,255,599 | + | -0.8 | |||
2,255,607 | - | +0.7 | |||
2,255,773 | - | Shewana3_1900 | 0.12 | +0.7 | |
2,256,011 | - | Shewana3_1900 | 0.22 | -0.8 |
Or see this region's nucleotide sequence