Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1788

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
2,111,670	+		Shewana3_1787	0.37	+0.8
2,111,671	+		Shewana3_1787	0.37	+0.8
2,111,671	+		Shewana3_1787	0.37	+0.8
2,111,671	+		Shewana3_1787	0.37	+0.8
2,111,671	+		Shewana3_1787	0.37	+0.8
2,111,671	+		Shewana3_1787	0.37	+0.8
2,111,671	+		Shewana3_1787	0.37	+0.8
2,111,678	-		Shewana3_1787	0.39	+0.8
2,111,678	-		Shewana3_1787	0.39	+0.8
2,111,679	-		Shewana3_1787	0.39	+0.8
2,111,679	-		Shewana3_1787	0.39	+0.8
2,111,679	-		Shewana3_1787	0.39	+0.8
2,111,679	-		Shewana3_1787	0.39	+0.8
2,111,679	-		Shewana3_1787	0.39	-0.2
2,111,689	-		Shewana3_1787	0.41	+0.8
2,111,828	+		Shewana3_1787	0.67	+2.1
2,111,838	+		Shewana3_1787	0.69	+0.1
2,111,843	+		Shewana3_1787	0.69	+1.8
2,111,843	+		Shewana3_1787	0.69	+2.8
2,111,843	+		Shewana3_1787	0.69	+1.2
2,111,843	+		Shewana3_1787	0.69	-1.4
2,111,851	-		Shewana3_1787	0.71	+0.8
2,111,851	-		Shewana3_1787	0.71	+0.8
2,111,941	+		Shewana3_1787	0.88	+0.4
2,111,941	+		Shewana3_1787	0.88	-0.5
2,111,942	+		Shewana3_1787	0.88	+0.8
2,111,942	+		Shewana3_1787	0.88	+1.4
2,111,942	+		Shewana3_1787	0.88	+0.8
2,111,949	-		Shewana3_1787	0.89	+0.8
2,111,962	+				-1.7
2,111,977	+				-0.2
2,111,977	+				-1.2
2,111,978	-				+0.8
2,111,979	+				-0.4
2,111,979	-				+0.8
2,111,979	-				+0.8
2,111,984	+				-0.7
2,111,985	-				+0.8
2,112,012	+				-0.4
2,112,021	+				+0.8
2,112,022	+				+0.8
2,112,024	-				+0.8
2,112,024	-				+1.8
2,112,024	-				+0.8
2,112,091	+				+0.8
2,112,099	-				+0.8
2,112,110	+				+0.8
2,112,154	+				-0.2
2,112,171	+				-0.8
2,112,237	+				+0.8
2,112,256	-				-0.2
2,112,268	+				+0.8
2,112,268	+				-0.2
2,112,276	-				+0.8
2,112,291	-				+0.8
2,112,347	+				+0.8
2,112,361	+				-0.2
2,112,367	+				-0.2
2,112,486	+				+0.8
2,112,511	+				+1.8
2,112,511	+				-0.2
2,112,532	+				+0.5
2,112,532	+				+0.8
2,112,540	-				+1.8
2,112,550	-				-0.2
2,112,555	+				-0.8
2,112,607	-				-0.8
2,112,705	+				-0.2
2,112,880	-		Shewana3_1788	0.14	+1.8
2,112,914	+		Shewana3_1788	0.15	-1.5
2,112,923	-		Shewana3_1788	0.15	+0.8
2,112,942	+		Shewana3_1788	0.16	+0.8
2,112,944	+		Shewana3_1788	0.16	-0.2
2,113,055	+		Shewana3_1788	0.20	-0.2
2,113,563	-		Shewana3_1788	0.40	+0.8
2,113,676	+		Shewana3_1788	0.44	-0.2
2,113,894	-		Shewana3_1788	0.53	+1.8
2,114,007	+		Shewana3_1788	0.57	-1.2
2,114,179	+		Shewana3_1788	0.64	+2.4
2,114,311	+		Shewana3_1788	0.69	+0.8
2,114,552	+		Shewana3_1788	0.78	+0.8
2,114,560	-		Shewana3_1788	0.78	+0.8
2,114,563	+		Shewana3_1788	0.78	+0.4
2,114,571	-		Shewana3_1788	0.79	+0.8
2,114,572	-		Shewana3_1788	0.79	-0.2
2,114,694	-		Shewana3_1788	0.84	+0.8
2,114,960	-				+3.4
2,115,141	+				+0.8
2,115,264	+				-1.2
2,115,269	+				-0.8
2,115,728	+		Shewana3_1789	0.45	+0.4
2,115,925	+		Shewana3_1789	0.77	-0.6
2,115,925	+		Shewana3_1789	0.77	+0.3
2,115,925	+		Shewana3_1789	0.77	+0.4
2,115,925	+		Shewana3_1789	0.77	-0.2
2,115,933	-		Shewana3_1789	0.78	+0.8
2,116,037	+				+0.4
2,116,113	-				+0.4