Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1623
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,909,142 | - | -0.1 | |||
1,909,309 | - | Shewana3_1622 | 0.27 | -0.2 | |
1,909,309 | - | Shewana3_1622 | 0.27 | -0.8 | |
1,909,314 | - | Shewana3_1622 | 0.28 | +0.1 | |
1,909,632 | - | Shewana3_1622 | 0.76 | -0.1 | |
1,909,689 | + | Shewana3_1622 | 0.85 | -0.1 | |
1,909,697 | - | Shewana3_1622 | 0.86 | +0.8 | |
1,909,726 | - | +0.8 | |||
1,909,805 | + | -1.2 | |||
1,910,182 | + | Shewana3_1623 | 0.27 | +1.8 | |
1,910,368 | - | Shewana3_1623 | 0.49 | +1.0 | |
1,910,368 | - | Shewana3_1623 | 0.49 | +0.7 | |
1,910,485 | - | Shewana3_1623 | 0.63 | +1.4 | |
1,910,736 | + | +0.5 | |||
1,910,868 | + | +0.6 | |||
1,911,350 | + | -0.2 | |||
1,911,358 | - | +0.8 | |||
1,911,446 | + | +0.1 |
Or see this region's nucleotide sequence