Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1423
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,652,577 | + | Shewana3_1422 | 0.65 | -0.8 | |
1,653,177 | - | Shewana3_1423 | 0.18 | +1.2 | |
1,653,191 | + | Shewana3_1423 | 0.21 | -0.8 | |
1,653,357 | - | Shewana3_1423 | 0.56 | +0.8 | |
1,653,400 | + | Shewana3_1423 | 0.66 | -0.3 | |
1,653,817 | - | Shewana3_1424 | 0.14 | +0.8 | |
1,654,067 | + | Shewana3_1424 | 0.29 | -1.8 | |
1,654,123 | + | Shewana3_1424 | 0.32 | -0.8 | |
1,654,183 | + | Shewana3_1424 | 0.36 | +0.1 | |
1,654,446 | - | Shewana3_1424 | 0.52 | +2.4 |
Or see this region's nucleotide sequence