Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1086

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,275,649	+		Shewana3_1085	0.17	+1.0
1,275,714	-		Shewana3_1085	0.25	-0.0
1,275,766	-		Shewana3_1085	0.32	+1.0
1,275,781	-		Shewana3_1085	0.34	-1.5
1,275,783	-		Shewana3_1085	0.34	+0.7
1,275,852	+		Shewana3_1085	0.43	-0.2
1,275,862	-		Shewana3_1085	0.44	-0.6
1,275,916	-		Shewana3_1085	0.51	+1.0
1,275,989	+		Shewana3_1085	0.60	+0.3
1,275,997	-		Shewana3_1085	0.61	+1.0
1,275,997	-		Shewana3_1085	0.61	+0.6
1,275,999	+		Shewana3_1085	0.61	+2.7
1,275,999	+		Shewana3_1085	0.61	+0.0
1,275,999	+		Shewana3_1085	0.61	-0.2
1,276,229	-				+1.0
1,276,295	+				-1.1
1,276,341	+				-1.0
1,276,394	+				-0.7
1,276,419	+				-0.4
1,276,593	+				-0.1
1,276,755	-		Shewana3_1086	0.16	-0.3
1,276,755	-		Shewana3_1086	0.16	+2.8
1,276,755	-		Shewana3_1086	0.16	-0.0
1,276,794	+		Shewana3_1086	0.19	+1.6
1,276,806	+		Shewana3_1086	0.20	+0.4
1,276,883	+		Shewana3_1086	0.27	+0.8
1,276,891	-		Shewana3_1086	0.27	-0.4
1,276,927	+		Shewana3_1086	0.30	+1.0
1,276,983	+		Shewana3_1086	0.35	+0.2
1,276,991	-		Shewana3_1086	0.36	+0.1
1,277,110	-		Shewana3_1086	0.46	-0.3
1,277,231	+		Shewana3_1086	0.57	-0.3
1,277,325	-		Shewana3_1086	0.65	+1.0
1,277,378	+		Shewana3_1086	0.69	+0.3
1,277,417	-		Shewana3_1086	0.73	+2.6
1,277,545	+		Shewana3_1086	0.84	-0.2
1,277,570	+		Shewana3_1086	0.86	-0.5
1,277,583	-		Shewana3_1086	0.87	-0.8
1,277,809	+				+0.4
1,278,008	+				+1.5
1,278,011	-				+0.3
1,278,049	+				+1.0
1,278,063	+				-1.3
1,278,140	+				+0.3
1,278,355	-				+1.0
1,278,418	-				+1.0
1,278,420	+				+0.1
1,278,457	+				-2.5
1,278,469	-				+1.0
1,278,559	-				+1.0
1,278,656	-		Shewana3_1087	0.10	+0.6
1,278,667	+		Shewana3_1087	0.11	-0.2
1,278,667	+		Shewana3_1087	0.11	-0.3
1,278,672	+		Shewana3_1087	0.11	-0.0
1,278,700	+		Shewana3_1087	0.11	+0.2