Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1053

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,231,351	-		Shewana3_1052	0.25	+0.0
1,231,351	-		Shewana3_1052	0.25	+0.0
1,231,444	-		Shewana3_1052	0.33	+4.2
1,231,444	-		Shewana3_1052	0.33	+3.4
1,231,480	+		Shewana3_1052	0.37	+0.2
1,231,706	+		Shewana3_1052	0.58	-0.5
1,231,876	-		Shewana3_1052	0.74	+1.0
1,231,917	+		Shewana3_1052	0.78	-0.7
1,231,932	-		Shewana3_1052	0.79	+0.3
1,232,128	+				+3.7
1,232,600	+		Shewana3_1053	0.13	+1.2
1,232,600	+		Shewana3_1053	0.13	-0.8
1,232,608	-		Shewana3_1053	0.13	+1.8
1,232,608	-		Shewana3_1053	0.13	+1.1
1,232,608	-		Shewana3_1053	0.13	-0.1
1,232,610	-		Shewana3_1053	0.13	+1.0
1,232,688	+		Shewana3_1053	0.16	+1.9
1,232,843	+		Shewana3_1053	0.21	+0.2
1,232,844	-		Shewana3_1053	0.21	+1.5
1,232,851	-		Shewana3_1053	0.21	+1.2
1,232,860	+		Shewana3_1053	0.21	+2.6
1,233,148	-		Shewana3_1053	0.31	-0.1
1,233,249	+		Shewana3_1053	0.34	+3.1
1,233,447	+		Shewana3_1053	0.40	-0.7
1,233,459	+		Shewana3_1053	0.41	-0.1
1,233,476	-		Shewana3_1053	0.41	+0.5
1,233,680	+		Shewana3_1053	0.48	+0.4
1,233,796	-		Shewana3_1053	0.52	+0.2
1,233,880	+		Shewana3_1053	0.55	-0.1
1,233,942	-		Shewana3_1053	0.57	-0.2
1,234,029	-		Shewana3_1053	0.60	+0.8
1,234,077	-		Shewana3_1053	0.61	+0.1
1,234,086	+		Shewana3_1053	0.61	-0.2
1,234,278	+		Shewana3_1053	0.68	+0.1
1,234,278	+		Shewana3_1053	0.68	-0.0
1,234,286	-		Shewana3_1053	0.68	+1.6
1,234,286	-		Shewana3_1053	0.68	+1.0
1,234,286	-		Shewana3_1053	0.68	+0.3
1,234,286	-		Shewana3_1053	0.68	+0.4
1,234,286	-		Shewana3_1053	0.68	+1.0
1,234,390	+		Shewana3_1053	0.71	-0.4
1,234,390	+		Shewana3_1053	0.71	-0.2
1,234,398	-		Shewana3_1053	0.72	-0.3
1,234,565	-		Shewana3_1053	0.77	+1.0
1,234,670	+		Shewana3_1053	0.81	-0.3
1,234,725	-		Shewana3_1053	0.82	+1.0
1,234,773	+		Shewana3_1053	0.84	-0.7
1,234,831	+		Shewana3_1053	0.86	+0.0
1,234,963	-				+1.0
1,234,986	-				+2.6
1,235,034	+				+0.5
1,235,073	-				+0.8
1,235,313	+				-1.1
1,235,443	-				-0.1
1,235,475	-				+0.2
1,235,557	+	torD	Shewana3_1054	0.11	-0.2
1,235,669	-	torD	Shewana3_1054	0.29	+0.0
1,235,729	-	torD	Shewana3_1054	0.39	-0.2
1,235,958	+	torD	Shewana3_1054	0.75	+0.2
1,236,139	+				+1.8
1,236,150	+				+0.3
1,236,213	+				-0.3
1,236,263	+				-0.3