Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1037
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,211,405 | + | +1.4 | |||
| 1,211,931 | + | Shewana3_1036 | 0.64 | -0.5 | |
| 1,212,063 | + | Shewana3_1036 | 0.78 | -0.6 | |
| 1,212,606 | - | prfC | Shewana3_1037 | 0.16 | +1.7 |
| 1,212,654 | - | prfC | Shewana3_1037 | 0.19 | +2.6 |
| 1,212,950 | + | prfC | Shewana3_1037 | 0.37 | +1.0 |
| 1,213,134 | + | prfC | Shewana3_1037 | 0.49 | +1.0 |
| 1,213,430 | - | prfC | Shewana3_1037 | 0.68 | +0.3 |
| 1,213,592 | + | prfC | Shewana3_1037 | 0.78 | +1.1 |
| 1,214,184 | + | +1.0 | |||
| 1,214,199 | - | -1.0 | |||
| 1,214,523 | - | Shewana3_1038 | 0.42 | +0.0 | |
| 1,214,616 | - | Shewana3_1038 | 0.55 | -1.5 |
Or see this region's nucleotide sequence