Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06575 and H281DRAFT_06576 overlap by 8 nucleotides H281DRAFT_06576 and H281DRAFT_06577 overlap by 30 nucleotides H281DRAFT_06577 and H281DRAFT_06578 are separated by 174 nucleotides
H281DRAFT_06575: H281DRAFT_06575 - PAS domain S-box-containing protein, at 16,607 to 18,796
_06575
H281DRAFT_06576: H281DRAFT_06576 - CheY chemotaxis protein or a CheY-like REC (receiver) domain, at 18,789 to 19,160
_06576
H281DRAFT_06577: H281DRAFT_06577 - hypothetical protein, at 19,131 to 19,541
_06577
H281DRAFT_06578: H281DRAFT_06578 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 19,716 to 20,573
_06578
Position (kb) 18
19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 17.855 kb on + strand, within H281DRAFT_06575 at 17.882 kb on - strand, within H281DRAFT_06575 at 17.882 kb on - strand, within H281DRAFT_06575 at 17.888 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.101 kb on - strand, within H281DRAFT_06575 at 18.400 kb on + strand, within H281DRAFT_06575 at 18.401 kb on - strand, within H281DRAFT_06575 at 18.413 kb on - strand, within H281DRAFT_06575 at 18.413 kb on - strand, within H281DRAFT_06575 at 18.527 kb on + strand, within H281DRAFT_06575 at 18.527 kb on + strand, within H281DRAFT_06575 at 18.598 kb on + strand at 18.607 kb on + strand at 18.607 kb on + strand at 18.608 kb on - strand at 18.608 kb on - strand at 18.609 kb on + strand at 18.610 kb on - strand at 18.691 kb on - strand at 18.691 kb on - strand at 18.691 kb on - strand at 18.788 kb on + strand at 18.789 kb on - strand at 18.933 kb on - strand, within H281DRAFT_06576 at 19.044 kb on + strand, within H281DRAFT_06576 at 19.045 kb on - strand, within H281DRAFT_06576 at 19.045 kb on - strand, within H281DRAFT_06576 at 19.117 kb on + strand at 19.145 kb on + strand at 19.145 kb on + strand at 19.146 kb on - strand at 19.159 kb on - strand at 19.339 kb on + strand, within H281DRAFT_06577 at 19.340 kb on - strand, within H281DRAFT_06577 at 19.340 kb on - strand, within H281DRAFT_06577 at 19.436 kb on - strand, within H281DRAFT_06577 at 19.436 kb on - strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.542 kb on - strand at 19.638 kb on - strand at 19.721 kb on + strand at 19.721 kb on + strand at 19.722 kb on - strand at 19.758 kb on - strand at 19.983 kb on - strand, within H281DRAFT_06578 at 20.046 kb on + strand, within H281DRAFT_06578 at 20.046 kb on + strand, within H281DRAFT_06578 at 20.047 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 17,855 + H281DRAFT_06575 0.57 +2.8 17,882 - H281DRAFT_06575 0.58 +0.3 17,882 - H281DRAFT_06575 0.58 -0.5 17,888 + H281DRAFT_06575 0.58 -0.4 18,100 + H281DRAFT_06575 0.68 -0.5 18,100 + H281DRAFT_06575 0.68 -0.3 18,100 + H281DRAFT_06575 0.68 +0.5 18,101 - H281DRAFT_06575 0.68 -0.6 18,400 + H281DRAFT_06575 0.82 +0.2 18,401 - H281DRAFT_06575 0.82 +0.4 18,413 - H281DRAFT_06575 0.82 -0.3 18,413 - H281DRAFT_06575 0.82 -0.3 18,527 + H281DRAFT_06575 0.88 -0.1 18,527 + H281DRAFT_06575 0.88 +1.2 18,598 + -1.0 18,607 + +1.1 18,607 + -0.4 18,608 - +0.3 18,608 - +0.6 18,609 + -0.2 18,610 - +0.4 18,691 - +0.1 18,691 - -1.1 18,691 - -2.9 18,788 + +0.0 18,789 - -1.4 18,933 - H281DRAFT_06576 0.39 +1.6 19,044 + H281DRAFT_06576 0.69 +0.2 19,045 - H281DRAFT_06576 0.69 +0.5 19,045 - H281DRAFT_06576 0.69 +1.4 19,117 + -0.4 19,145 + -0.4 19,145 + +0.4 19,146 - +0.7 19,159 - +0.3 19,339 + H281DRAFT_06577 0.51 +0.9 19,340 - H281DRAFT_06577 0.51 -0.2 19,340 - H281DRAFT_06577 0.51 -0.1 19,436 - H281DRAFT_06577 0.74 +1.6 19,436 - H281DRAFT_06577 0.74 -0.9 19,483 + H281DRAFT_06577 0.86 -0.1 19,483 + H281DRAFT_06577 0.86 +1.2 19,483 + H281DRAFT_06577 0.86 +0.3 19,484 - H281DRAFT_06577 0.86 +0.2 19,484 - H281DRAFT_06577 0.86 +0.3 19,484 - H281DRAFT_06577 0.86 +0.9 19,542 - +0.5 19,638 - -0.4 19,721 + +0.5 19,721 + -0.1 19,722 - +0.9 19,758 - +0.2 19,983 - H281DRAFT_06578 0.31 +0.2 20,046 + H281DRAFT_06578 0.38 +0.7 20,046 + H281DRAFT_06578 0.38 +0.3 20,047 - +0.9
Or see this region's nucleotide sequence