Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06518

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06517 and H281DRAFT_06518 are separated by 92 nucleotides H281DRAFT_06517: H281DRAFT_06517 - DNA-binding transcriptional regulator, LysR family, at 65,893 to 66,837 _06517 H281DRAFT_06518: H281DRAFT_06518 - hypothetical protein, at 66,930 to 67,103 _06518 Position (kb) 66 67 68Strain fitness (log2 ratio) -2 -1 0 1at 66.234 kb on + strand, within H281DRAFT_06517at 66.444 kb on - strandat 66.444 kb on - strand, within H281DRAFT_06517at 66.843 kb on - strandat 66.849 kb on - strandat 66.849 kb on - strandat 66.904 kb on + strandat 67.047 kb on - strand, within H281DRAFT_06518at 67.047 kb on - strand, within H281DRAFT_06518at 67.061 kb on + strand, within H281DRAFT_06518at 67.061 kb on + strand, within H281DRAFT_06518at 67.062 kb on - strand, within H281DRAFT_06518at 67.062 kb on - strand, within H281DRAFT_06518

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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66,234 + H281DRAFT_06517 0.36 -0.6
66,444 - +0.6
66,444 - H281DRAFT_06517 0.58 +0.6
66,843 - -0.8
66,849 - -1.8
66,849 - -0.7
66,904 + +0.1
67,047 - H281DRAFT_06518 0.67 -0.5
67,047 - H281DRAFT_06518 0.67 +0.5
67,061 + H281DRAFT_06518 0.75 -0.4
67,061 + H281DRAFT_06518 0.75 -1.2
67,062 - H281DRAFT_06518 0.76 +0.8
67,062 - H281DRAFT_06518 0.76 -1.2

Or see this region's nucleotide sequence