Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06449 and H281DRAFT_06450 are separated by 39 nucleotides H281DRAFT_06450 and H281DRAFT_06451 are separated by 148 nucleotides H281DRAFT_06451 and H281DRAFT_06452 overlap by 8 nucleotides
H281DRAFT_06449: H281DRAFT_06449 - hypothetical protein, at 55,416 to 55,631
_06449
H281DRAFT_06450: H281DRAFT_06450 - ATP-dependent Clp protease ATP-binding subunit ClpC, at 55,671 to 58,448
_06450
H281DRAFT_06451: H281DRAFT_06451 - Uncharacterized protein, linocin/CFP29 family, at 58,597 to 59,400
_06451
H281DRAFT_06452: H281DRAFT_06452 - putative iron-dependent peroxidase, at 59,393 to 60,439
_06452
Position (kb) 55
56
57
58
59 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 54.756 kb on - strand at 54.784 kb on + strand at 54.784 kb on + strand at 54.785 kb on - strand at 54.817 kb on + strand at 54.817 kb on + strand at 55.168 kb on + strand at 55.215 kb on + strand at 55.215 kb on + strand at 55.216 kb on - strand at 55.300 kb on - strand at 55.331 kb on + strand at 55.374 kb on + strand at 55.380 kb on - strand at 55.415 kb on + strand at 55.447 kb on - strand, within H281DRAFT_06449 at 55.447 kb on - strand, within H281DRAFT_06449 at 55.550 kb on + strand, within H281DRAFT_06449 at 55.550 kb on + strand, within H281DRAFT_06449 at 55.550 kb on + strand, within H281DRAFT_06449 at 55.550 kb on + strand, within H281DRAFT_06449 at 55.550 kb on + strand, within H281DRAFT_06449 at 55.551 kb on - strand, within H281DRAFT_06449 at 55.632 kb on + strand at 55.651 kb on + strand at 55.651 kb on + strand at 55.652 kb on - strand at 55.672 kb on + strand at 55.672 kb on + strand at 55.814 kb on - strand at 56.293 kb on - strand, within H281DRAFT_06450 at 56.305 kb on - strand, within H281DRAFT_06450 at 56.360 kb on - strand, within H281DRAFT_06450 at 56.414 kb on - strand, within H281DRAFT_06450 at 56.613 kb on + strand, within H281DRAFT_06450 at 56.717 kb on + strand, within H281DRAFT_06450 at 56.856 kb on - strand, within H281DRAFT_06450 at 57.047 kb on + strand, within H281DRAFT_06450 at 57.047 kb on + strand, within H281DRAFT_06450 at 57.048 kb on - strand, within H281DRAFT_06450 at 57.049 kb on + strand, within H281DRAFT_06450 at 57.223 kb on + strand, within H281DRAFT_06450 at 57.223 kb on + strand, within H281DRAFT_06450 at 57.224 kb on - strand, within H281DRAFT_06450 at 57.224 kb on - strand, within H281DRAFT_06450 at 57.499 kb on - strand, within H281DRAFT_06450 at 57.812 kb on - strand, within H281DRAFT_06450 at 57.886 kb on + strand, within H281DRAFT_06450 at 57.886 kb on + strand, within H281DRAFT_06450 at 57.886 kb on + strand, within H281DRAFT_06450 at 57.886 kb on + strand, within H281DRAFT_06450 at 58.013 kb on + strand, within H281DRAFT_06450 at 58.015 kb on + strand, within H281DRAFT_06450 at 58.015 kb on + strand, within H281DRAFT_06450 at 58.015 kb on + strand, within H281DRAFT_06450 at 58.016 kb on - strand, within H281DRAFT_06450 at 58.090 kb on + strand, within H281DRAFT_06450 at 58.090 kb on + strand, within H281DRAFT_06450 at 58.091 kb on - strand, within H281DRAFT_06450 at 58.260 kb on - strand at 58.566 kb on - strand at 58.668 kb on - strand at 58.668 kb on - strand at 58.690 kb on - strand, within H281DRAFT_06451 at 58.698 kb on + strand, within H281DRAFT_06451 at 58.756 kb on + strand at 58.759 kb on + strand, within H281DRAFT_06451 at 58.869 kb on - strand, within H281DRAFT_06451 at 58.896 kb on - strand, within H281DRAFT_06451 at 59.405 kb on + strand at 59.406 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 54,756 - -0.1 54,784 + +0.4 54,784 + +0.4 54,785 - +0.0 54,817 + +0.4 54,817 + -0.5 55,168 + +0.3 55,215 + -0.2 55,215 + -0.3 55,216 - +1.0 55,300 - +0.7 55,331 + -1.0 55,374 + +0.8 55,380 - +1.0 55,415 + +0.3 55,447 - H281DRAFT_06449 0.14 -0.6 55,447 - H281DRAFT_06449 0.14 -0.4 55,550 + H281DRAFT_06449 0.62 +0.4 55,550 + H281DRAFT_06449 0.62 +0.3 55,550 + H281DRAFT_06449 0.62 +0.4 55,550 + H281DRAFT_06449 0.62 +0.1 55,550 + H281DRAFT_06449 0.62 +1.4 55,551 - H281DRAFT_06449 0.62 +0.9 55,632 + -0.5 55,651 + +0.7 55,651 + -0.2 55,652 - +0.3 55,672 + -0.7 55,672 + -0.1 55,814 - -2.4 56,293 - H281DRAFT_06450 0.22 +0.7 56,305 - H281DRAFT_06450 0.23 +1.0 56,360 - H281DRAFT_06450 0.25 -0.1 56,414 - H281DRAFT_06450 0.27 -1.0 56,613 + H281DRAFT_06450 0.34 -0.1 56,717 + H281DRAFT_06450 0.38 +0.3 56,856 - H281DRAFT_06450 0.43 +0.7 57,047 + H281DRAFT_06450 0.50 -0.5 57,047 + H281DRAFT_06450 0.50 -1.3 57,048 - H281DRAFT_06450 0.50 -1.0 57,049 + H281DRAFT_06450 0.50 +0.4 57,223 + H281DRAFT_06450 0.56 -0.0 57,223 + H281DRAFT_06450 0.56 -0.3 57,224 - H281DRAFT_06450 0.56 +1.4 57,224 - H281DRAFT_06450 0.56 +0.3 57,499 - H281DRAFT_06450 0.66 +1.2 57,812 - H281DRAFT_06450 0.77 +0.0 57,886 + H281DRAFT_06450 0.80 -0.3 57,886 + H281DRAFT_06450 0.80 -0.2 57,886 + H281DRAFT_06450 0.80 +1.6 57,886 + H281DRAFT_06450 0.80 -0.4 58,013 + H281DRAFT_06450 0.84 -0.4 58,015 + H281DRAFT_06450 0.84 +0.1 58,015 + H281DRAFT_06450 0.84 +1.3 58,015 + H281DRAFT_06450 0.84 +0.7 58,016 - H281DRAFT_06450 0.84 +1.5 58,090 + H281DRAFT_06450 0.87 +0.8 58,090 + H281DRAFT_06450 0.87 -0.2 58,091 - H281DRAFT_06450 0.87 -1.5 58,260 - +3.0 58,566 - +0.2 58,668 - -1.0 58,668 - -0.3 58,690 - H281DRAFT_06451 0.12 +0.8 58,698 + H281DRAFT_06451 0.13 -0.6 58,756 + +0.3 58,759 + H281DRAFT_06451 0.20 +0.7 58,869 - H281DRAFT_06451 0.34 +0.3 58,896 - H281DRAFT_06451 0.37 +0.3 59,405 + -0.4 59,406 - +1.1
Or see this region's nucleotide sequence