Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06331 and H281DRAFT_06332 overlap by 16 nucleotides H281DRAFT_06332 and H281DRAFT_06333 overlap by 4 nucleotides H281DRAFT_06333 and H281DRAFT_06334 overlap by 1 nucleotides H281DRAFT_06334 and H281DRAFT_06335 overlap by 4 nucleotides
H281DRAFT_06331: H281DRAFT_06331 - NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, at 4,582 to 5,973
_06331
H281DRAFT_06332: H281DRAFT_06332 - Uncharacterized anaerobic dehydrogenase, at 5,958 to 6,272
_06332
H281DRAFT_06333: H281DRAFT_06333 - peptide/nickel transport system ATP-binding protein, at 6,269 to 8,113
_06333
H281DRAFT_06334: H281DRAFT_06334 - peptide/nickel transport system permease protein, at 8,113 to 9,060
_06334
H281DRAFT_06335: H281DRAFT_06335 - peptide/nickel transport system permease protein, at 9,057 to 10,010
_06335
Position (kb) 6
7
8
9 Strain fitness (log2 ratio) -2
-1
0
1 at 5.471 kb on + strand, within H281DRAFT_06331 at 5.471 kb on + strand, within H281DRAFT_06331 at 5.472 kb on - strand, within H281DRAFT_06331 at 5.489 kb on + strand, within H281DRAFT_06331 at 5.579 kb on + strand at 5.579 kb on + strand, within H281DRAFT_06331 at 5.579 kb on + strand, within H281DRAFT_06331 at 5.580 kb on - strand, within H281DRAFT_06331 at 5.709 kb on + strand, within H281DRAFT_06331 at 5.816 kb on + strand, within H281DRAFT_06331 at 5.852 kb on - strand at 5.852 kb on - strand at 5.852 kb on - strand at 5.959 kb on + strand at 5.974 kb on - strand at 6.377 kb on - strand at 6.385 kb on + strand at 6.385 kb on + strand at 6.669 kb on + strand, within H281DRAFT_06333 at 6.670 kb on - strand, within H281DRAFT_06333 at 6.927 kb on + strand, within H281DRAFT_06333 at 6.928 kb on - strand, within H281DRAFT_06333 at 7.476 kb on + strand, within H281DRAFT_06333 at 7.476 kb on + strand, within H281DRAFT_06333 at 7.477 kb on - strand, within H281DRAFT_06333 at 7.825 kb on - strand, within H281DRAFT_06333 at 8.402 kb on + strand, within H281DRAFT_06334 at 8.441 kb on + strand, within H281DRAFT_06334 at 8.442 kb on - strand, within H281DRAFT_06334 at 8.502 kb on - strand, within H281DRAFT_06334 at 8.792 kb on + strand, within H281DRAFT_06334 at 8.793 kb on - strand, within H281DRAFT_06334 at 8.835 kb on - strand, within H281DRAFT_06334 at 8.835 kb on - strand, within H281DRAFT_06334 at 9.008 kb on + strand at 9.010 kb on + strand at 9.011 kb on - strand at 9.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 5,471 + H281DRAFT_06331 0.64 +0.0 5,471 + H281DRAFT_06331 0.64 +0.2 5,472 - H281DRAFT_06331 0.64 +1.1 5,489 + H281DRAFT_06331 0.65 +0.3 5,579 + -0.1 5,579 + H281DRAFT_06331 0.72 +0.5 5,579 + H281DRAFT_06331 0.72 -0.8 5,580 - H281DRAFT_06331 0.72 +1.0 5,709 + H281DRAFT_06331 0.81 -2.2 5,816 + H281DRAFT_06331 0.89 +0.5 5,852 - +0.0 5,852 - +0.1 5,852 - -0.2 5,959 + -0.2 5,974 - +1.1 6,377 - -0.9 6,385 + +0.3 6,385 + +0.0 6,669 + H281DRAFT_06333 0.22 -0.7 6,670 - H281DRAFT_06333 0.22 -0.0 6,927 + H281DRAFT_06333 0.36 -0.0 6,928 - H281DRAFT_06333 0.36 +1.0 7,476 + H281DRAFT_06333 0.65 +0.7 7,476 + H281DRAFT_06333 0.65 -1.7 7,477 - H281DRAFT_06333 0.65 -0.1 7,825 - H281DRAFT_06333 0.84 -0.1 8,402 + H281DRAFT_06334 0.30 +0.3 8,441 + H281DRAFT_06334 0.35 +1.0 8,442 - H281DRAFT_06334 0.35 +0.3 8,502 - H281DRAFT_06334 0.41 -0.7 8,792 + H281DRAFT_06334 0.72 +0.9 8,793 - H281DRAFT_06334 0.72 -0.4 8,835 - H281DRAFT_06334 0.76 -2.3 8,835 - H281DRAFT_06334 0.76 -0.4 9,008 + +0.8 9,010 + -0.0 9,011 - +0.9 9,046 - +0.8
Or see this region's nucleotide sequence