Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06222 and H281DRAFT_06223 are separated by 139 nucleotides H281DRAFT_06223 and H281DRAFT_06224 are separated by 7 nucleotides H281DRAFT_06224 and H281DRAFT_06225 are separated by 614 nucleotides
H281DRAFT_06222: H281DRAFT_06222 - 5S rRNA. Bacterial TSU, at 1 to 100
_06222
H281DRAFT_06223: H281DRAFT_06223 - Hydroxyneurosporene synthase (CrtC), at 240 to 425
_06223
H281DRAFT_06224: H281DRAFT_06224 - hippurate hydrolase, at 433 to 1,413
_06224
H281DRAFT_06225: H281DRAFT_06225 - Anaerobic selenocysteine-containing dehydrogenase, at 2,028 to 3,905
_06225
Position (kb) 0
1
2 Strain fitness (log2 ratio) -2
-1
0
1
2 at 0.356 kb on + strand, within H281DRAFT_06223 at 0.356 kb on + strand, within H281DRAFT_06223 at 0.357 kb on - strand at 0.399 kb on + strand, within H281DRAFT_06223 at 0.400 kb on - strand, within H281DRAFT_06223 at 0.400 kb on - strand, within H281DRAFT_06223 at 0.400 kb on - strand, within H281DRAFT_06223 at 0.447 kb on + strand at 0.492 kb on + strand at 0.492 kb on + strand at 0.492 kb on + strand at 0.493 kb on - strand at 0.493 kb on - strand at 0.527 kb on + strand at 0.528 kb on - strand at 0.608 kb on + strand, within H281DRAFT_06224 at 0.758 kb on + strand, within H281DRAFT_06224 at 0.759 kb on - strand, within H281DRAFT_06224 at 0.759 kb on - strand, within H281DRAFT_06224 at 0.795 kb on - strand, within H281DRAFT_06224 at 1.104 kb on + strand, within H281DRAFT_06224 at 1.195 kb on + strand, within H281DRAFT_06224 at 1.196 kb on - strand, within H281DRAFT_06224 at 1.258 kb on + strand, within H281DRAFT_06224 at 1.258 kb on + strand, within H281DRAFT_06224 at 1.259 kb on - strand at 1.440 kb on + strand at 1.468 kb on + strand at 1.468 kb on + strand at 1.468 kb on + strand at 1.641 kb on + strand at 1.641 kb on + strand at 1.641 kb on + strand at 1.644 kb on + strand at 1.645 kb on - strand at 1.645 kb on - strand at 1.645 kb on - strand at 1.645 kb on - strand at 1.645 kb on - strand at 1.647 kb on + strand at 1.647 kb on + strand at 1.648 kb on - strand at 1.666 kb on - strand at 1.727 kb on + strand at 1.728 kb on - strand at 1.776 kb on + strand at 1.776 kb on + strand at 1.898 kb on - strand at 1.971 kb on - strand at 2.119 kb on + strand at 2.151 kb on + strand at 2.152 kb on - strand at 2.152 kb on - strand at 2.152 kb on - strand at 2.157 kb on + strand at 2.157 kb on + strand at 2.213 kb on + strand at 2.214 kb on - strand at 2.277 kb on + strand, within H281DRAFT_06225 at 2.278 kb on - strand, within H281DRAFT_06225 at 2.278 kb on - strand, within H281DRAFT_06225 at 2.278 kb on - strand, within H281DRAFT_06225 at 2.279 kb on + strand, within H281DRAFT_06225 at 2.279 kb on + strand, within H281DRAFT_06225 at 2.279 kb on + strand, within H281DRAFT_06225 at 2.279 kb on + strand, within H281DRAFT_06225 at 2.280 kb on - strand, within H281DRAFT_06225 at 2.280 kb on - strand, within H281DRAFT_06225 at 2.283 kb on + strand, within H281DRAFT_06225 at 2.283 kb on + strand, within H281DRAFT_06225 at 2.284 kb on - strand, within H281DRAFT_06225 at 2.334 kb on - strand, within H281DRAFT_06225 at 2.334 kb on - strand, within H281DRAFT_06225
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 356 + H281DRAFT_06223 0.62 -0.3 356 + H281DRAFT_06223 0.62 +0.6 357 - +1.1 399 + H281DRAFT_06223 0.85 +0.1 400 - H281DRAFT_06223 0.86 +0.1 400 - H281DRAFT_06223 0.86 +0.2 400 - H281DRAFT_06223 0.86 +0.4 447 + -0.0 492 + +0.2 492 + -0.1 492 + +1.3 493 - +0.1 493 - -0.1 527 + -0.4 528 - +2.4 608 + H281DRAFT_06224 0.18 +0.1 758 + H281DRAFT_06224 0.33 +1.6 759 - H281DRAFT_06224 0.33 +1.6 759 - H281DRAFT_06224 0.33 +0.2 795 - H281DRAFT_06224 0.37 -0.2 1,104 + H281DRAFT_06224 0.68 +0.7 1,195 + H281DRAFT_06224 0.78 -0.1 1,196 - H281DRAFT_06224 0.78 -0.5 1,258 + H281DRAFT_06224 0.84 +1.2 1,258 + H281DRAFT_06224 0.84 +0.4 1,259 - +1.1 1,440 + +1.1 1,468 + +2.4 1,468 + +0.9 1,468 + -0.1 1,641 + +0.8 1,641 + -0.5 1,641 + +0.1 1,644 + +1.0 1,645 - -0.3 1,645 - -0.5 1,645 - +0.3 1,645 - -0.5 1,645 - +0.5 1,647 + +0.8 1,647 + +0.6 1,648 - +0.0 1,666 - -0.7 1,727 + -0.2 1,728 - -2.2 1,776 + +0.2 1,776 + +0.6 1,898 - -1.1 1,971 - -0.2 2,119 + +0.5 2,151 + +0.1 2,152 - -0.8 2,152 - -1.4 2,152 - -0.8 2,157 + +1.8 2,157 + +0.1 2,213 + -0.8 2,214 - -0.4 2,277 + H281DRAFT_06225 0.13 +0.4 2,278 - H281DRAFT_06225 0.13 +0.9 2,278 - H281DRAFT_06225 0.13 +0.3 2,278 - H281DRAFT_06225 0.13 +0.1 2,279 + H281DRAFT_06225 0.13 +1.1 2,279 + H281DRAFT_06225 0.13 -1.0 2,279 + H281DRAFT_06225 0.13 -0.5 2,279 + H281DRAFT_06225 0.13 -0.4 2,280 - H281DRAFT_06225 0.13 -0.1 2,280 - H281DRAFT_06225 0.13 +0.6 2,283 + H281DRAFT_06225 0.14 +1.0 2,283 + H281DRAFT_06225 0.14 +0.7 2,284 - H281DRAFT_06225 0.14 +1.1 2,334 - H281DRAFT_06225 0.16 -0.5 2,334 - H281DRAFT_06225 0.16 -0.3
Or see this region's nucleotide sequence