Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05971 and H281DRAFT_05972 are separated by 136 nucleotides H281DRAFT_05972 and H281DRAFT_05973 are separated by 162 nucleotides H281DRAFT_05973 and H281DRAFT_05974 overlap by 4 nucleotides H281DRAFT_05974 and H281DRAFT_05975 overlap by 4 nucleotides
H281DRAFT_05971: H281DRAFT_05971 - Uncharacterized membrane protein YoaK, UPF0700 family, at 113,669 to 114,481
_05971
H281DRAFT_05972: H281DRAFT_05972 - conserved hypothetical protein, at 114,618 to 114,932
_05972
H281DRAFT_05973: H281DRAFT_05973 - carbon-monoxide dehydrogenase small subunit, at 115,095 to 115,586
_05973
H281DRAFT_05974: H281DRAFT_05974 - carbon-monoxide dehydrogenase medium subunit, at 115,583 to 116,443
_05974
H281DRAFT_05975: H281DRAFT_05975 - carbon-monoxide dehydrogenase large subunit, at 116,440 to 118,881
_05975
Position (kb) 115
116 Strain fitness (log2 ratio) -1
0
1
2 at 114.400 kb on - strand at 114.604 kb on + strand at 114.621 kb on + strand at 114.857 kb on - strand, within H281DRAFT_05972 at 114.857 kb on - strand, within H281DRAFT_05972 at 114.859 kb on + strand, within H281DRAFT_05972 at 114.896 kb on - strand, within H281DRAFT_05972 at 115.076 kb on - strand at 115.239 kb on - strand, within H281DRAFT_05973 at 115.614 kb on - strand at 115.888 kb on - strand, within H281DRAFT_05974 at 116.430 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 114,400 - -1.5 114,604 + +0.2 114,621 + -0.9 114,857 - H281DRAFT_05972 0.76 +0.6 114,857 - H281DRAFT_05972 0.76 -1.7 114,859 + H281DRAFT_05972 0.77 +0.7 114,896 - H281DRAFT_05972 0.88 -0.9 115,076 - +0.1 115,239 - H281DRAFT_05973 0.29 +1.8 115,614 - +0.4 115,888 - H281DRAFT_05974 0.35 -1.2 116,430 + -0.3
Or see this region's nucleotide sequence