Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05870 and H281DRAFT_05871 are separated by 13 nucleotides H281DRAFT_05871 and H281DRAFT_05872 are separated by 10 nucleotides H281DRAFT_05872 and H281DRAFT_05873 overlap by 4 nucleotides
H281DRAFT_05870: H281DRAFT_05870 - amino acid ABC transporter substrate-binding protein, PAAT family, at 6,941 to 7,792
_05870
H281DRAFT_05871: H281DRAFT_05871 - amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-), at 7,806 to 8,522
_05871
H281DRAFT_05872: H281DRAFT_05872 - amino acid ABC transporter membrane protein 2, PAAT family, at 8,533 to 9,177
_05872
H281DRAFT_05873: H281DRAFT_05873 - amino acid ABC transporter ATP-binding protein, PAAT family, at 9,174 to 9,926
_05873
Position (kb) 7
8
9 Strain fitness (log2 ratio) -1
0
1 at 6.834 kb on + strand at 7.126 kb on + strand, within H281DRAFT_05870 at 7.127 kb on - strand, within H281DRAFT_05870 at 7.640 kb on + strand, within H281DRAFT_05870 at 7.641 kb on - strand, within H281DRAFT_05870 at 7.739 kb on + strand at 7.837 kb on - strand at 7.837 kb on - strand at 7.978 kb on - strand, within H281DRAFT_05871 at 7.997 kb on + strand, within H281DRAFT_05871 at 8.109 kb on + strand, within H281DRAFT_05871 at 8.109 kb on + strand, within H281DRAFT_05871 at 8.110 kb on - strand, within H281DRAFT_05871 at 8.260 kb on - strand, within H281DRAFT_05871 at 8.359 kb on - strand, within H281DRAFT_05871 at 8.600 kb on + strand, within H281DRAFT_05872 at 8.750 kb on - strand, within H281DRAFT_05872 at 8.764 kb on + strand, within H281DRAFT_05872 at 8.830 kb on + strand, within H281DRAFT_05872 at 8.831 kb on - strand, within H281DRAFT_05872 at 8.831 kb on - strand, within H281DRAFT_05872 at 8.916 kb on - strand, within H281DRAFT_05872 at 9.113 kb on - strand at 9.171 kb on + strand at 9.171 kb on + strand at 9.172 kb on - strand at 9.286 kb on + strand, within H281DRAFT_05873
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 6,834 + -0.9 7,126 + H281DRAFT_05870 0.22 -0.1 7,127 - H281DRAFT_05870 0.22 -0.4 7,640 + H281DRAFT_05870 0.82 -0.1 7,641 - H281DRAFT_05870 0.82 +0.1 7,739 + +0.2 7,837 - -0.4 7,837 - -0.2 7,978 - H281DRAFT_05871 0.24 +0.7 7,997 + H281DRAFT_05871 0.27 +0.2 8,109 + H281DRAFT_05871 0.42 +0.2 8,109 + H281DRAFT_05871 0.42 +1.3 8,110 - H281DRAFT_05871 0.42 -0.3 8,260 - H281DRAFT_05871 0.63 +0.1 8,359 - H281DRAFT_05871 0.77 +0.2 8,600 + H281DRAFT_05872 0.10 +0.2 8,750 - H281DRAFT_05872 0.34 +0.3 8,764 + H281DRAFT_05872 0.36 -0.1 8,830 + H281DRAFT_05872 0.46 -0.6 8,831 - H281DRAFT_05872 0.46 +0.1 8,831 - H281DRAFT_05872 0.46 -0.4 8,916 - H281DRAFT_05872 0.59 +0.1 9,113 - -1.7 9,171 + +1.7 9,171 + +0.3 9,172 - +0.7 9,286 + H281DRAFT_05873 0.15 -1.1
Or see this region's nucleotide sequence