Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05160 and H281DRAFT_05161 overlap by 4 nucleotides H281DRAFT_05161 and H281DRAFT_05162 are separated by 368 nucleotides H281DRAFT_05162 and H281DRAFT_05163 are separated by 184 nucleotides
H281DRAFT_05160: H281DRAFT_05160 - allantoicase, at 113,631 to 114,644
_05160
H281DRAFT_05161: H281DRAFT_05161 - ureidoglycolate lyase, at 114,641 to 115,153
_05161
H281DRAFT_05162: H281DRAFT_05162 - Uncharacterized membrane protein, at 115,522 to 116,715
_05162
H281DRAFT_05163: H281DRAFT_05163 - 5-hydroxyisourate hydrolase, at 116,900 to 117,253
_05163
Position (kb) 115
116
117 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 114.535 kb on - strand, within H281DRAFT_05160 at 115.275 kb on - strand at 115.275 kb on - strand at 115.280 kb on + strand at 115.426 kb on + strand at 115.427 kb on - strand at 115.492 kb on - strand at 115.631 kb on + strand at 115.632 kb on - strand at 115.668 kb on + strand, within H281DRAFT_05162 at 115.669 kb on - strand, within H281DRAFT_05162 at 115.871 kb on + strand, within H281DRAFT_05162 at 115.871 kb on + strand, within H281DRAFT_05162 at 115.872 kb on - strand, within H281DRAFT_05162 at 115.961 kb on + strand, within H281DRAFT_05162 at 115.962 kb on - strand, within H281DRAFT_05162 at 115.973 kb on + strand, within H281DRAFT_05162 at 115.974 kb on - strand, within H281DRAFT_05162 at 115.974 kb on - strand, within H281DRAFT_05162 at 116.027 kb on + strand, within H281DRAFT_05162 at 116.066 kb on + strand, within H281DRAFT_05162 at 116.187 kb on - strand, within H281DRAFT_05162 at 116.263 kb on + strand, within H281DRAFT_05162 at 116.263 kb on + strand, within H281DRAFT_05162 at 116.264 kb on - strand, within H281DRAFT_05162 at 116.303 kb on + strand, within H281DRAFT_05162 at 116.391 kb on - strand, within H281DRAFT_05162 at 116.510 kb on + strand, within H281DRAFT_05162 at 116.511 kb on - strand, within H281DRAFT_05162 at 116.511 kb on - strand, within H281DRAFT_05162 at 116.511 kb on - strand, within H281DRAFT_05162 at 116.525 kb on + strand, within H281DRAFT_05162 at 116.543 kb on - strand, within H281DRAFT_05162 at 116.628 kb on - strand at 117.305 kb on + strand at 117.342 kb on - strand at 117.387 kb on - strand at 117.387 kb on - strand at 117.387 kb on - strand at 117.429 kb on + strand at 117.430 kb on - strand at 117.430 kb on - strand at 117.497 kb on + strand at 117.497 kb on + strand at 117.539 kb on + strand at 117.539 kb on + strand at 117.539 kb on + strand at 117.540 kb on - strand at 117.680 kb on + strand at 117.680 kb on + strand at 117.681 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 114,535 - H281DRAFT_05160 0.89 -3.9 115,275 - +0.8 115,275 - -0.8 115,280 + +0.1 115,426 + +0.4 115,427 - +0.1 115,492 - -0.3 115,631 + -2.9 115,632 - -1.4 115,668 + H281DRAFT_05162 0.12 +0.2 115,669 - H281DRAFT_05162 0.12 +0.1 115,871 + H281DRAFT_05162 0.29 -4.6 115,871 + H281DRAFT_05162 0.29 -4.1 115,872 - H281DRAFT_05162 0.29 -3.6 115,961 + H281DRAFT_05162 0.37 -3.0 115,962 - H281DRAFT_05162 0.37 -2.0 115,973 + H281DRAFT_05162 0.38 -2.9 115,974 - H281DRAFT_05162 0.38 -3.2 115,974 - H281DRAFT_05162 0.38 -3.6 116,027 + H281DRAFT_05162 0.42 -0.7 116,066 + H281DRAFT_05162 0.46 -2.1 116,187 - H281DRAFT_05162 0.56 -2.6 116,263 + H281DRAFT_05162 0.62 -2.9 116,263 + H281DRAFT_05162 0.62 -2.3 116,264 - H281DRAFT_05162 0.62 -2.1 116,303 + H281DRAFT_05162 0.65 -0.9 116,391 - H281DRAFT_05162 0.73 -0.6 116,510 + H281DRAFT_05162 0.83 -1.8 116,511 - H281DRAFT_05162 0.83 -2.0 116,511 - H281DRAFT_05162 0.83 -1.8 116,511 - H281DRAFT_05162 0.83 -2.6 116,525 + H281DRAFT_05162 0.84 -2.1 116,543 - H281DRAFT_05162 0.86 -1.1 116,628 - -3.1 117,305 + -1.6 117,342 - +0.3 117,387 - +0.5 117,387 - +0.1 117,387 - -1.0 117,429 + -1.1 117,430 - +0.1 117,430 - -1.1 117,497 + -1.2 117,497 + +0.6 117,539 + +0.7 117,539 + -0.9 117,539 + +1.0 117,540 - -0.3 117,680 + +0.6 117,680 + +0.7 117,681 - -0.8
Or see this region's nucleotide sequence