Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05159
Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Deoxyadenosine 5-monophosphate 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
111,996 | - | -2.9 | |||
112,039 | + | -4.3 | |||
112,040 | - | -3.5 | |||
112,040 | - | -2.9 | |||
112,271 | + | H281DRAFT_05158 | 0.26 | -3.9 | |
112,456 | - | H281DRAFT_05158 | 0.46 | -2.5 | |
112,586 | - | H281DRAFT_05158 | 0.59 | -3.0 | |
112,589 | - | H281DRAFT_05158 | 0.60 | -0.4 | |
112,736 | - | -0.4 | |||
112,762 | + | H281DRAFT_05158 | 0.78 | -1.8 | |
112,867 | - | H281DRAFT_05158 | 0.89 | -4.7 | |
113,129 | + | H281DRAFT_05159 | 0.31 | -3.2 | |
113,129 | + | +0.6 | |||
113,406 | - | H281DRAFT_05159 | 0.84 | -3.0 | |
113,423 | - | H281DRAFT_05159 | 0.87 | -4.5 | |
113,562 | - | -5.4 | |||
113,796 | + | H281DRAFT_05160 | 0.16 | -3.3 | |
114,026 | + | H281DRAFT_05160 | 0.39 | -4.2 | |
114,051 | + | H281DRAFT_05160 | 0.41 | -3.7 | |
114,081 | - | H281DRAFT_05160 | 0.44 | -4.5 | |
114,081 | - | H281DRAFT_05160 | 0.44 | -4.6 | |
114,081 | - | H281DRAFT_05160 | 0.44 | -3.4 | |
114,081 | - | -1.0 | |||
114,136 | - | H281DRAFT_05160 | 0.50 | +0.1 | |
114,231 | - | H281DRAFT_05160 | 0.59 | -3.6 | |
114,409 | - | H281DRAFT_05160 | 0.77 | -2.7 | |
114,409 | - | H281DRAFT_05160 | 0.77 | -5.9 | |
114,438 | + | H281DRAFT_05160 | 0.80 | -3.2 | |
114,439 | - | H281DRAFT_05160 | 0.80 | -5.1 |
Or see this region's nucleotide sequence