Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05048 and H281DRAFT_05049 overlap by 1 nucleotides H281DRAFT_05049 and H281DRAFT_05050 are separated by 361 nucleotides H281DRAFT_05050 and H281DRAFT_05051 are separated by 160 nucleotides
H281DRAFT_05048: H281DRAFT_05048 - Tripartite tricarboxylate transporter TctA family protein, at 237,681 to 239,060
_05048
H281DRAFT_05049: H281DRAFT_05049 - hypothetical protein, at 239,060 to 239,560
_05049
H281DRAFT_05050: H281DRAFT_05050 - 3-hydroxy-3-methylglutaryl-coenzyme A reductase, at 239,922 to 241,208
_05050
H281DRAFT_05051: H281DRAFT_05051 - transcriptional regulator, GntR family, at 241,369 to 242,757
_05051
Position (kb) 239
240
241
242 Strain fitness (log2 ratio) -2
-1
0
1 at 239.332 kb on - strand, within H281DRAFT_05049 at 239.417 kb on + strand, within H281DRAFT_05049 at 239.465 kb on + strand, within H281DRAFT_05049 at 239.466 kb on - strand, within H281DRAFT_05049 at 239.749 kb on + strand at 239.750 kb on - strand at 239.750 kb on - strand at 239.952 kb on + strand at 240.036 kb on + strand at 240.066 kb on - strand, within H281DRAFT_05050 at 240.066 kb on - strand, within H281DRAFT_05050 at 240.328 kb on + strand, within H281DRAFT_05050 at 240.329 kb on - strand, within H281DRAFT_05050 at 240.454 kb on + strand, within H281DRAFT_05050 at 240.494 kb on - strand, within H281DRAFT_05050 at 240.636 kb on - strand, within H281DRAFT_05050 at 240.765 kb on + strand, within H281DRAFT_05050 at 241.112 kb on - strand at 241.112 kb on - strand at 241.210 kb on - strand at 241.263 kb on - strand at 241.273 kb on + strand at 241.480 kb on + strand at 241.926 kb on - strand, within H281DRAFT_05051 at 241.959 kb on - strand, within H281DRAFT_05051 at 242.019 kb on + strand, within H281DRAFT_05051 at 242.042 kb on + strand, within H281DRAFT_05051
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 239,332 - H281DRAFT_05049 0.54 -0.3 239,417 + H281DRAFT_05049 0.71 +1.0 239,465 + H281DRAFT_05049 0.81 -0.9 239,466 - H281DRAFT_05049 0.81 +1.3 239,749 + +0.8 239,750 - -1.1 239,750 - +0.2 239,952 + -1.1 240,036 + -0.5 240,066 - H281DRAFT_05050 0.11 -1.8 240,066 - H281DRAFT_05050 0.11 -0.2 240,328 + H281DRAFT_05050 0.32 -1.7 240,329 - H281DRAFT_05050 0.32 -0.1 240,454 + H281DRAFT_05050 0.41 -0.7 240,494 - H281DRAFT_05050 0.44 -0.1 240,636 - H281DRAFT_05050 0.55 +0.2 240,765 + H281DRAFT_05050 0.66 -0.9 241,112 - +1.0 241,112 - +0.4 241,210 - -0.1 241,263 - -0.7 241,273 + +0.6 241,480 + -0.1 241,926 - H281DRAFT_05051 0.40 +0.9 241,959 - H281DRAFT_05051 0.42 +0.3 242,019 + H281DRAFT_05051 0.47 +0.2 242,042 + H281DRAFT_05051 0.48 -0.2
Or see this region's nucleotide sequence