Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04933 and H281DRAFT_04934 are separated by 256 nucleotides H281DRAFT_04934 and H281DRAFT_04935 are separated by 161 nucleotides H281DRAFT_04935 and H281DRAFT_04936 are separated by 310 nucleotides
H281DRAFT_04933: H281DRAFT_04933 - Nitroreductase, at 115,290 to 115,913
_04933
H281DRAFT_04934: H281DRAFT_04934 - Sensors of blue-light using FAD, at 116,170 to 116,685
_04934
H281DRAFT_04935: H281DRAFT_04935 - D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4), at 116,847 to 118,499
_04935
H281DRAFT_04936: H281DRAFT_04936 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 118,810 to 120,285
_04936
Position (kb) 116
117
118
119 Strain fitness (log2 ratio) -1
0
1 at 115.882 kb on + strand at 116.129 kb on - strand at 116.132 kb on - strand at 116.170 kb on - strand at 116.170 kb on - strand at 116.261 kb on + strand, within H281DRAFT_04934 at 116.498 kb on - strand, within H281DRAFT_04934 at 117.413 kb on - strand, within H281DRAFT_04935 at 118.241 kb on + strand, within H281DRAFT_04935 at 118.289 kb on + strand, within H281DRAFT_04935 at 118.290 kb on - strand, within H281DRAFT_04935 at 118.611 kb on + strand at 118.612 kb on - strand at 119.146 kb on + strand, within H281DRAFT_04936 at 119.146 kb on + strand, within H281DRAFT_04936 at 119.147 kb on - strand, within H281DRAFT_04936 at 119.155 kb on + strand, within H281DRAFT_04936 at 119.192 kb on + strand, within H281DRAFT_04936 at 119.192 kb on + strand, within H281DRAFT_04936
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 115,882 + -0.3 116,129 - +0.3 116,132 - -0.9 116,170 - -0.6 116,170 - -0.0 116,261 + H281DRAFT_04934 0.18 +0.5 116,498 - H281DRAFT_04934 0.64 -0.7 117,413 - H281DRAFT_04935 0.34 +0.1 118,241 + H281DRAFT_04935 0.84 +0.4 118,289 + H281DRAFT_04935 0.87 -0.8 118,290 - H281DRAFT_04935 0.87 -1.2 118,611 + +0.9 118,612 - +1.1 119,146 + H281DRAFT_04936 0.23 +1.0 119,146 + H281DRAFT_04936 0.23 +1.1 119,147 - H281DRAFT_04936 0.23 -0.4 119,155 + H281DRAFT_04936 0.23 -0.4 119,192 + H281DRAFT_04936 0.26 +0.3 119,192 + H281DRAFT_04936 0.26 +0.1
Or see this region's nucleotide sequence