Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04702 and H281DRAFT_04703 are separated by 47 nucleotides H281DRAFT_04703 and H281DRAFT_04704 are separated by 29 nucleotides H281DRAFT_04704 and H281DRAFT_04705 overlap by 4 nucleotides H281DRAFT_04705 and H281DRAFT_04706 are separated by 48 nucleotides
H281DRAFT_04702: H281DRAFT_04702 - para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase, at 114,698 to 116,587
_04702
H281DRAFT_04703: H281DRAFT_04703 - ketopantoate hydroxymethyltransferase, at 116,635 to 117,450
_04703
H281DRAFT_04704: H281DRAFT_04704 - Deoxyadenosine/deoxycytidine kinase, at 117,480 to 118,160
_04704
H281DRAFT_04705: H281DRAFT_04705 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 118,157 to 118,690
_04705
H281DRAFT_04706: H281DRAFT_04706 - poly(A) polymerase, at 118,739 to 120,337
_04706
Position (kb) 117
118
119 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 116.517 kb on + strand at 116.518 kb on - strand at 116.518 kb on - strand at 116.518 kb on - strand at 116.518 kb on - strand at 116.688 kb on - strand at 117.444 kb on - strand at 117.626 kb on - strand, within H281DRAFT_04704 at 117.640 kb on + strand at 117.641 kb on - strand, within H281DRAFT_04704 at 117.664 kb on + strand, within H281DRAFT_04704 at 117.665 kb on - strand, within H281DRAFT_04704 at 117.965 kb on - strand, within H281DRAFT_04704 at 118.086 kb on - strand, within H281DRAFT_04704 at 118.086 kb on - strand, within H281DRAFT_04704 at 118.086 kb on - strand, within H281DRAFT_04704 at 118.696 kb on - strand at 118.696 kb on - strand at 118.696 kb on - strand at 118.696 kb on - strand at 118.710 kb on - strand at 118.889 kb on - strand at 119.006 kb on - strand, within H281DRAFT_04706
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 116,517 + -0.2 116,518 - +0.5 116,518 - +0.3 116,518 - +0.0 116,518 - +1.6 116,688 - +0.9 117,444 - -1.9 117,626 - H281DRAFT_04704 0.21 +0.1 117,640 + +1.9 117,641 - H281DRAFT_04704 0.24 -1.0 117,664 + H281DRAFT_04704 0.27 -3.4 117,665 - H281DRAFT_04704 0.27 -1.7 117,965 - H281DRAFT_04704 0.71 -0.0 118,086 - H281DRAFT_04704 0.89 +2.1 118,086 - H281DRAFT_04704 0.89 +0.5 118,086 - H281DRAFT_04704 0.89 +1.6 118,696 - -0.9 118,696 - +0.2 118,696 - -0.0 118,696 - +0.3 118,710 - +0.2 118,889 - +0.1 119,006 - H281DRAFT_04706 0.17 -2.7
Or see this region's nucleotide sequence