Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04317 and H281DRAFT_04318 are separated by 323 nucleotides H281DRAFT_04318 and H281DRAFT_04319 are separated by 311 nucleotides H281DRAFT_04319 and H281DRAFT_04320 are separated by 81 nucleotides
H281DRAFT_04317: H281DRAFT_04317 - multidrug resistance protein, MATE family, at 35,283 to 36,695
_04317
H281DRAFT_04318: H281DRAFT_04318 - ribosome-associated protein, at 37,019 to 37,237
_04318
H281DRAFT_04319: H281DRAFT_04319 - hypothetical protein, at 37,549 to 38,013
_04319
H281DRAFT_04320: H281DRAFT_04320 - hypothetical protein, at 38,095 to 38,376
_04320
Position (kb) 37
38 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 36.134 kb on - strand, within H281DRAFT_04317 at 36.134 kb on - strand, within H281DRAFT_04317 at 36.134 kb on - strand, within H281DRAFT_04317 at 36.397 kb on + strand, within H281DRAFT_04317 at 36.398 kb on - strand, within H281DRAFT_04317 at 36.398 kb on - strand, within H281DRAFT_04317 at 36.787 kb on - strand at 36.834 kb on + strand at 36.835 kb on - strand at 36.835 kb on - strand at 36.928 kb on + strand at 36.928 kb on + strand at 36.929 kb on - strand at 37.058 kb on + strand, within H281DRAFT_04318 at 37.058 kb on + strand, within H281DRAFT_04318 at 37.059 kb on - strand, within H281DRAFT_04318 at 37.203 kb on + strand, within H281DRAFT_04318 at 37.272 kb on + strand at 37.273 kb on - strand at 37.273 kb on - strand at 37.451 kb on + strand at 37.452 kb on - strand at 37.533 kb on + strand at 37.533 kb on + strand at 37.533 kb on + strand at 37.534 kb on - strand at 37.534 kb on - strand at 37.563 kb on + strand at 37.563 kb on + strand at 37.563 kb on + strand at 37.564 kb on - strand at 37.564 kb on - strand at 37.564 kb on - strand at 37.656 kb on + strand, within H281DRAFT_04319 at 37.657 kb on - strand, within H281DRAFT_04319 at 37.664 kb on + strand, within H281DRAFT_04319 at 37.664 kb on + strand, within H281DRAFT_04319 at 37.664 kb on + strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319 at 37.782 kb on - strand, within H281DRAFT_04319 at 37.782 kb on - strand, within H281DRAFT_04319 at 37.885 kb on + strand, within H281DRAFT_04319 at 37.886 kb on - strand, within H281DRAFT_04319 at 37.886 kb on - strand, within H281DRAFT_04319 at 37.886 kb on - strand, within H281DRAFT_04319 at 37.886 kb on - strand, within H281DRAFT_04319 at 38.004 kb on + strand at 38.004 kb on + strand at 38.081 kb on + strand at 38.112 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 36,134 - H281DRAFT_04317 0.60 -1.0 36,134 - H281DRAFT_04317 0.60 +0.4 36,134 - H281DRAFT_04317 0.60 -1.2 36,397 + H281DRAFT_04317 0.79 -0.4 36,398 - H281DRAFT_04317 0.79 -2.4 36,398 - H281DRAFT_04317 0.79 +1.2 36,787 - -0.8 36,834 + -0.3 36,835 - +0.3 36,835 - +0.1 36,928 + -0.6 36,928 + -0.5 36,929 - +1.3 37,058 + H281DRAFT_04318 0.18 -0.3 37,058 + H281DRAFT_04318 0.18 +0.2 37,059 - H281DRAFT_04318 0.18 -0.5 37,203 + H281DRAFT_04318 0.84 +1.0 37,272 + +0.7 37,273 - +1.8 37,273 - -0.3 37,451 + +0.8 37,452 - +1.1 37,533 + +0.2 37,533 + -0.4 37,533 + -0.9 37,534 - -0.4 37,534 - +1.8 37,563 + +0.2 37,563 + +5.1 37,563 + +0.7 37,564 - +0.6 37,564 - -0.2 37,564 - +1.2 37,656 + H281DRAFT_04319 0.23 +0.2 37,657 - H281DRAFT_04319 0.23 +0.1 37,664 + H281DRAFT_04319 0.25 +0.4 37,664 + H281DRAFT_04319 0.25 +0.3 37,664 + H281DRAFT_04319 0.25 -3.4 37,665 - H281DRAFT_04319 0.25 -0.3 37,665 - H281DRAFT_04319 0.25 -0.9 37,665 - H281DRAFT_04319 0.25 -0.9 37,665 - H281DRAFT_04319 0.25 +0.3 37,782 - H281DRAFT_04319 0.50 +0.6 37,782 - H281DRAFT_04319 0.50 -0.4 37,885 + H281DRAFT_04319 0.72 +0.1 37,886 - H281DRAFT_04319 0.72 +0.5 37,886 - H281DRAFT_04319 0.72 +1.0 37,886 - H281DRAFT_04319 0.72 +0.7 37,886 - H281DRAFT_04319 0.72 +0.3 38,004 + +0.6 38,004 + +0.2 38,081 + -0.3 38,112 + +1.0
Or see this region's nucleotide sequence