Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04042 and H281DRAFT_04043 are separated by 77 nucleotides H281DRAFT_04043 and H281DRAFT_04044 are separated by 56 nucleotides H281DRAFT_04044 and H281DRAFT_04045 overlap by 1 nucleotides
H281DRAFT_04042: H281DRAFT_04042 - phenylacetate transporter <small>(from data)</small>, at 141,182 to 142,702
_04042
H281DRAFT_04043: H281DRAFT_04043 - Pimeloyl-ACP methyl ester carboxylesterase, at 142,780 to 143,745
_04043
H281DRAFT_04044: H281DRAFT_04044 - D-aminopeptidase DppA. Metallo peptidase. MEROPS family M55, at 143,802 to 144,635
_04044
H281DRAFT_04045: H281DRAFT_04045 - L-aminopeptidase DmpA. Serine peptidase. MEROPS family S58, at 144,635 to 145,747
_04045
Position (kb) 142
143
144 Strain fitness (log2 ratio) -1
0
1
2 at 141.824 kb on - strand, within H281DRAFT_04042 at 142.126 kb on - strand, within H281DRAFT_04042 at 142.213 kb on - strand, within H281DRAFT_04042 at 142.221 kb on + strand, within H281DRAFT_04042 at 142.221 kb on + strand, within H281DRAFT_04042 at 142.221 kb on + strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.264 kb on - strand, within H281DRAFT_04042 at 142.264 kb on - strand, within H281DRAFT_04042 at 142.276 kb on - strand, within H281DRAFT_04042 at 142.314 kb on + strand, within H281DRAFT_04042 at 142.315 kb on - strand, within H281DRAFT_04042 at 142.315 kb on - strand, within H281DRAFT_04042 at 142.320 kb on + strand, within H281DRAFT_04042 at 142.553 kb on + strand at 142.554 kb on - strand at 142.582 kb on + strand at 142.583 kb on - strand at 142.583 kb on - strand at 142.586 kb on + strand at 142.663 kb on - strand at 142.663 kb on - strand at 142.739 kb on + strand at 142.739 kb on + strand at 142.739 kb on + strand at 142.740 kb on - strand at 142.740 kb on - strand at 142.740 kb on - strand at 142.740 kb on - strand at 142.974 kb on + strand, within H281DRAFT_04043 at 142.974 kb on + strand, within H281DRAFT_04043 at 142.974 kb on + strand, within H281DRAFT_04043 at 142.974 kb on + strand, within H281DRAFT_04043 at 142.975 kb on - strand, within H281DRAFT_04043 at 142.975 kb on - strand at 142.975 kb on - strand, within H281DRAFT_04043 at 142.975 kb on - strand, within H281DRAFT_04043 at 142.975 kb on - strand, within H281DRAFT_04043 at 143.007 kb on + strand, within H281DRAFT_04043 at 143.308 kb on + strand, within H281DRAFT_04043 at 143.309 kb on - strand, within H281DRAFT_04043 at 143.309 kb on - strand, within H281DRAFT_04043 at 143.433 kb on + strand at 143.437 kb on + strand, within H281DRAFT_04043 at 143.502 kb on - strand, within H281DRAFT_04043 at 143.569 kb on + strand, within H281DRAFT_04043 at 143.709 kb on - strand at 143.746 kb on + strand at 143.746 kb on + strand at 143.746 kb on + strand at 143.747 kb on - strand at 144.203 kb on - strand, within H281DRAFT_04044 at 144.290 kb on + strand, within H281DRAFT_04044 at 144.290 kb on + strand, within H281DRAFT_04044 at 144.290 kb on + strand, within H281DRAFT_04044 at 144.358 kb on + strand, within H281DRAFT_04044 at 144.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 141,824 - H281DRAFT_04042 0.42 +0.2 142,126 - H281DRAFT_04042 0.62 +0.7 142,213 - H281DRAFT_04042 0.68 -0.1 142,221 + H281DRAFT_04042 0.68 -0.1 142,221 + H281DRAFT_04042 0.68 +0.1 142,221 + H281DRAFT_04042 0.68 +0.6 142,222 - H281DRAFT_04042 0.68 +0.9 142,222 - H281DRAFT_04042 0.68 -1.0 142,222 - H281DRAFT_04042 0.68 -0.1 142,222 - H281DRAFT_04042 0.68 -0.1 142,222 - H281DRAFT_04042 0.68 -0.0 142,264 - H281DRAFT_04042 0.71 -0.2 142,264 - H281DRAFT_04042 0.71 +0.2 142,276 - H281DRAFT_04042 0.72 +0.5 142,314 + H281DRAFT_04042 0.74 +0.3 142,315 - H281DRAFT_04042 0.74 -0.3 142,315 - H281DRAFT_04042 0.74 +0.4 142,320 + H281DRAFT_04042 0.75 +0.4 142,553 + -1.1 142,554 - +0.1 142,582 + -1.6 142,583 - -1.0 142,583 - +0.4 142,586 + -0.1 142,663 - +0.6 142,663 - +0.4 142,739 + +0.2 142,739 + +0.7 142,739 + -0.2 142,740 - +0.9 142,740 - +0.2 142,740 - -0.1 142,740 - +0.0 142,974 + H281DRAFT_04043 0.20 +1.2 142,974 + H281DRAFT_04043 0.20 +0.3 142,974 + H281DRAFT_04043 0.20 -0.6 142,974 + H281DRAFT_04043 0.20 +0.5 142,975 - H281DRAFT_04043 0.20 -0.7 142,975 - -0.1 142,975 - H281DRAFT_04043 0.20 -0.4 142,975 - H281DRAFT_04043 0.20 -0.2 142,975 - H281DRAFT_04043 0.20 -0.4 143,007 + H281DRAFT_04043 0.23 -0.1 143,308 + H281DRAFT_04043 0.55 +1.4 143,309 - H281DRAFT_04043 0.55 -1.4 143,309 - H281DRAFT_04043 0.55 -1.2 143,433 + +1.3 143,437 + H281DRAFT_04043 0.68 +0.2 143,502 - H281DRAFT_04043 0.75 +0.5 143,569 + H281DRAFT_04043 0.82 +0.5 143,709 - +1.1 143,746 + +0.2 143,746 + -0.0 143,746 + +0.2 143,747 - -0.8 144,203 - H281DRAFT_04044 0.48 -0.1 144,290 + H281DRAFT_04044 0.59 -0.6 144,290 + H281DRAFT_04044 0.59 -0.2 144,290 + H281DRAFT_04044 0.59 +0.6 144,358 + H281DRAFT_04044 0.67 -0.1 144,689 + +2.1
Or see this region's nucleotide sequence