Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04040 and H281DRAFT_04041 are separated by 106 nucleotides H281DRAFT_04041 and H281DRAFT_04042 are separated by 132 nucleotides H281DRAFT_04042 and H281DRAFT_04043 are separated by 77 nucleotides
H281DRAFT_04040: H281DRAFT_04040 - oxygen-independent coproporphyrinogen-3 oxidase, at 139,473 to 140,858
_04040
H281DRAFT_04041: H281DRAFT_04041 - tRNA_Leu_CAA, at 140,965 to 141,049
_04041
H281DRAFT_04042: H281DRAFT_04042 - phenylacetate transporter <small>(from data)</small>, at 141,182 to 142,702
_04042
H281DRAFT_04043: H281DRAFT_04043 - Pimeloyl-ACP methyl ester carboxylesterase, at 142,780 to 143,745
_04043
Position (kb) 141
142
143 Strain fitness (log2 ratio) -2
-1
0
1
2 at 140.220 kb on - strand, within H281DRAFT_04040 at 140.234 kb on + strand, within H281DRAFT_04040 at 140.291 kb on + strand, within H281DRAFT_04040 at 140.331 kb on + strand, within H281DRAFT_04040 at 140.332 kb on - strand, within H281DRAFT_04040 at 140.332 kb on - strand, within H281DRAFT_04040 at 140.338 kb on - strand, within H281DRAFT_04040 at 140.338 kb on - strand, within H281DRAFT_04040 at 140.424 kb on + strand, within H281DRAFT_04040 at 140.493 kb on + strand, within H281DRAFT_04040 at 140.493 kb on + strand, within H281DRAFT_04040 at 140.569 kb on + strand, within H281DRAFT_04040 at 140.569 kb on + strand at 140.569 kb on + strand, within H281DRAFT_04040 at 140.569 kb on + strand, within H281DRAFT_04040 at 140.570 kb on - strand, within H281DRAFT_04040 at 140.661 kb on + strand, within H281DRAFT_04040 at 140.661 kb on + strand, within H281DRAFT_04040 at 140.681 kb on + strand, within H281DRAFT_04040 at 140.814 kb on + strand at 141.099 kb on + strand at 141.100 kb on - strand at 141.516 kb on + strand, within H281DRAFT_04042 at 141.516 kb on + strand, within H281DRAFT_04042 at 141.516 kb on + strand, within H281DRAFT_04042 at 141.516 kb on + strand, within H281DRAFT_04042 at 141.568 kb on + strand, within H281DRAFT_04042 at 141.569 kb on - strand, within H281DRAFT_04042 at 141.570 kb on + strand, within H281DRAFT_04042 at 141.570 kb on + strand, within H281DRAFT_04042 at 141.570 kb on + strand, within H281DRAFT_04042 at 141.570 kb on + strand, within H281DRAFT_04042 at 141.571 kb on - strand, within H281DRAFT_04042 at 141.571 kb on - strand, within H281DRAFT_04042 at 141.571 kb on - strand, within H281DRAFT_04042 at 141.571 kb on - strand, within H281DRAFT_04042 at 141.673 kb on - strand, within H281DRAFT_04042 at 141.673 kb on - strand, within H281DRAFT_04042 at 141.824 kb on - strand, within H281DRAFT_04042 at 142.126 kb on - strand, within H281DRAFT_04042 at 142.213 kb on - strand, within H281DRAFT_04042 at 142.221 kb on + strand, within H281DRAFT_04042 at 142.221 kb on + strand, within H281DRAFT_04042 at 142.221 kb on + strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.222 kb on - strand, within H281DRAFT_04042 at 142.264 kb on - strand, within H281DRAFT_04042 at 142.264 kb on - strand, within H281DRAFT_04042 at 142.276 kb on - strand, within H281DRAFT_04042 at 142.314 kb on + strand, within H281DRAFT_04042 at 142.315 kb on - strand, within H281DRAFT_04042 at 142.315 kb on - strand, within H281DRAFT_04042 at 142.320 kb on + strand, within H281DRAFT_04042 at 142.553 kb on + strand at 142.554 kb on - strand at 142.582 kb on + strand at 142.583 kb on - strand at 142.583 kb on - strand at 142.586 kb on + strand at 142.663 kb on - strand at 142.663 kb on - strand at 142.739 kb on + strand at 142.739 kb on + strand at 142.739 kb on + strand at 142.740 kb on - strand at 142.740 kb on - strand at 142.740 kb on - strand at 142.740 kb on - strand at 142.974 kb on + strand, within H281DRAFT_04043 at 142.974 kb on + strand, within H281DRAFT_04043 at 142.974 kb on + strand, within H281DRAFT_04043 at 142.974 kb on + strand, within H281DRAFT_04043 at 142.975 kb on - strand, within H281DRAFT_04043 at 142.975 kb on - strand at 142.975 kb on - strand, within H281DRAFT_04043 at 142.975 kb on - strand, within H281DRAFT_04043 at 142.975 kb on - strand, within H281DRAFT_04043 at 143.007 kb on + strand, within H281DRAFT_04043 at 143.308 kb on + strand, within H281DRAFT_04043 at 143.309 kb on - strand, within H281DRAFT_04043 at 143.309 kb on - strand, within H281DRAFT_04043 at 143.433 kb on + strand at 143.437 kb on + strand, within H281DRAFT_04043 at 143.502 kb on - strand, within H281DRAFT_04043 at 143.569 kb on + strand, within H281DRAFT_04043
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 140,220 - H281DRAFT_04040 0.54 +0.3 140,234 + H281DRAFT_04040 0.55 +0.4 140,291 + H281DRAFT_04040 0.59 -0.4 140,331 + H281DRAFT_04040 0.62 +0.2 140,332 - H281DRAFT_04040 0.62 +0.4 140,332 - H281DRAFT_04040 0.62 -1.0 140,338 - H281DRAFT_04040 0.62 +0.3 140,338 - H281DRAFT_04040 0.62 +0.1 140,424 + H281DRAFT_04040 0.69 -0.4 140,493 + H281DRAFT_04040 0.74 -0.6 140,493 + H281DRAFT_04040 0.74 -1.9 140,569 + H281DRAFT_04040 0.79 -0.1 140,569 + +0.9 140,569 + H281DRAFT_04040 0.79 +1.9 140,569 + H281DRAFT_04040 0.79 +0.1 140,570 - H281DRAFT_04040 0.79 -0.1 140,661 + H281DRAFT_04040 0.86 +0.5 140,661 + H281DRAFT_04040 0.86 +1.2 140,681 + H281DRAFT_04040 0.87 +0.3 140,814 + -0.6 141,099 + +0.1 141,100 - -0.4 141,516 + H281DRAFT_04042 0.22 -0.1 141,516 + H281DRAFT_04042 0.22 -0.9 141,516 + H281DRAFT_04042 0.22 +0.5 141,516 + H281DRAFT_04042 0.22 +0.1 141,568 + H281DRAFT_04042 0.25 -0.4 141,569 - H281DRAFT_04042 0.25 -0.2 141,570 + H281DRAFT_04042 0.26 -0.4 141,570 + H281DRAFT_04042 0.26 +1.0 141,570 + H281DRAFT_04042 0.26 +1.5 141,570 + H281DRAFT_04042 0.26 +0.0 141,571 - H281DRAFT_04042 0.26 +0.3 141,571 - H281DRAFT_04042 0.26 +1.3 141,571 - H281DRAFT_04042 0.26 +0.1 141,571 - H281DRAFT_04042 0.26 -0.0 141,673 - H281DRAFT_04042 0.32 +0.2 141,673 - H281DRAFT_04042 0.32 -0.1 141,824 - H281DRAFT_04042 0.42 +0.2 142,126 - H281DRAFT_04042 0.62 +0.7 142,213 - H281DRAFT_04042 0.68 -0.1 142,221 + H281DRAFT_04042 0.68 -0.1 142,221 + H281DRAFT_04042 0.68 +0.1 142,221 + H281DRAFT_04042 0.68 +0.6 142,222 - H281DRAFT_04042 0.68 +0.9 142,222 - H281DRAFT_04042 0.68 -1.0 142,222 - H281DRAFT_04042 0.68 -0.1 142,222 - H281DRAFT_04042 0.68 -0.1 142,222 - H281DRAFT_04042 0.68 -0.0 142,264 - H281DRAFT_04042 0.71 -0.2 142,264 - H281DRAFT_04042 0.71 +0.2 142,276 - H281DRAFT_04042 0.72 +0.5 142,314 + H281DRAFT_04042 0.74 +0.3 142,315 - H281DRAFT_04042 0.74 -0.3 142,315 - H281DRAFT_04042 0.74 +0.4 142,320 + H281DRAFT_04042 0.75 +0.4 142,553 + -1.1 142,554 - +0.1 142,582 + -1.6 142,583 - -1.0 142,583 - +0.4 142,586 + -0.1 142,663 - +0.6 142,663 - +0.4 142,739 + +0.2 142,739 + +0.7 142,739 + -0.2 142,740 - +0.9 142,740 - +0.2 142,740 - -0.1 142,740 - +0.0 142,974 + H281DRAFT_04043 0.20 +1.2 142,974 + H281DRAFT_04043 0.20 +0.3 142,974 + H281DRAFT_04043 0.20 -0.6 142,974 + H281DRAFT_04043 0.20 +0.5 142,975 - H281DRAFT_04043 0.20 -0.7 142,975 - -0.1 142,975 - H281DRAFT_04043 0.20 -0.4 142,975 - H281DRAFT_04043 0.20 -0.2 142,975 - H281DRAFT_04043 0.20 -0.4 143,007 + H281DRAFT_04043 0.23 -0.1 143,308 + H281DRAFT_04043 0.55 +1.4 143,309 - H281DRAFT_04043 0.55 -1.4 143,309 - H281DRAFT_04043 0.55 -1.2 143,433 + +1.3 143,437 + H281DRAFT_04043 0.68 +0.2 143,502 - H281DRAFT_04043 0.75 +0.5 143,569 + H281DRAFT_04043 0.82 +0.5
Or see this region's nucleotide sequence