Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03906 and H281DRAFT_03907 are separated by 241 nucleotides H281DRAFT_03907 and H281DRAFT_03908 overlap by 35 nucleotides H281DRAFT_03908 and H281DRAFT_03909 are separated by 55 nucleotides
H281DRAFT_03906: H281DRAFT_03906 - D-methionine transport system ATP-binding protein, at 2,346 to 3,380
_03906
H281DRAFT_03907: H281DRAFT_03907 - Lysophospholipase, alpha-beta hydrolase superfamily, at 3,622 to 4,575
_03907
H281DRAFT_03908: H281DRAFT_03908 - Enoyl-CoA hydratase/carnithine racemase, at 4,541 to 5,341
_03908
H281DRAFT_03909: H281DRAFT_03909 - Acetoin utilization deacetylase AcuC, at 5,397 to 6,371
_03909
Position (kb) 3
4
5 Strain fitness (log2 ratio) -1
0
1
2 at 3.082 kb on + strand, within H281DRAFT_03906 at 3.082 kb on + strand, within H281DRAFT_03906 at 3.369 kb on + strand at 3.369 kb on + strand at 3.370 kb on - strand at 3.450 kb on + strand at 3.475 kb on - strand at 3.479 kb on + strand at 3.479 kb on + strand at 3.527 kb on - strand at 3.731 kb on - strand, within H281DRAFT_03907 at 3.746 kb on + strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.747 kb on - strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.898 kb on + strand, within H281DRAFT_03907 at 3.899 kb on - strand, within H281DRAFT_03907 at 3.899 kb on - strand, within H281DRAFT_03907 at 3.919 kb on + strand, within H281DRAFT_03907 at 3.919 kb on + strand, within H281DRAFT_03907 at 3.941 kb on + strand, within H281DRAFT_03907 at 3.996 kb on + strand, within H281DRAFT_03907 at 3.996 kb on + strand at 3.996 kb on + strand, within H281DRAFT_03907 at 4.024 kb on + strand, within H281DRAFT_03907 at 4.025 kb on - strand, within H281DRAFT_03907 at 4.444 kb on + strand, within H281DRAFT_03907 at 4.444 kb on + strand, within H281DRAFT_03907 at 4.445 kb on - strand, within H281DRAFT_03907 at 4.726 kb on + strand, within H281DRAFT_03908 at 4.727 kb on - strand, within H281DRAFT_03908 at 4.966 kb on + strand, within H281DRAFT_03908 at 4.966 kb on + strand, within H281DRAFT_03908 at 4.966 kb on + strand, within H281DRAFT_03908 at 4.967 kb on - strand, within H281DRAFT_03908 at 5.082 kb on + strand, within H281DRAFT_03908 at 5.085 kb on + strand, within H281DRAFT_03908 at 5.289 kb on + strand at 5.378 kb on + strand at 5.458 kb on + strand at 5.459 kb on - strand at 5.515 kb on - strand, within H281DRAFT_03909 at 5.540 kb on - strand, within H281DRAFT_03909 at 5.540 kb on - strand, within H281DRAFT_03909
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 3,082 + H281DRAFT_03906 0.71 +0.3 3,082 + H281DRAFT_03906 0.71 -0.4 3,369 + +0.1 3,369 + +0.4 3,370 - -1.2 3,450 + +0.3 3,475 - +0.8 3,479 + +0.6 3,479 + -0.5 3,527 - -0.2 3,731 - H281DRAFT_03907 0.11 -0.8 3,746 + H281DRAFT_03907 0.13 +0.3 3,747 - H281DRAFT_03907 0.13 +0.6 3,747 - H281DRAFT_03907 0.13 +0.2 3,747 - H281DRAFT_03907 0.13 +0.6 3,747 - H281DRAFT_03907 0.13 -0.4 3,747 - H281DRAFT_03907 0.13 +0.9 3,898 + H281DRAFT_03907 0.29 +1.4 3,898 + H281DRAFT_03907 0.29 +0.5 3,898 + H281DRAFT_03907 0.29 -0.9 3,898 + H281DRAFT_03907 0.29 +0.4 3,898 + H281DRAFT_03907 0.29 -0.5 3,899 - H281DRAFT_03907 0.29 +0.8 3,899 - H281DRAFT_03907 0.29 +0.3 3,919 + H281DRAFT_03907 0.31 +0.1 3,919 + H281DRAFT_03907 0.31 +0.8 3,941 + H281DRAFT_03907 0.33 -0.6 3,996 + H281DRAFT_03907 0.39 +1.2 3,996 + +0.9 3,996 + H281DRAFT_03907 0.39 -0.1 4,024 + H281DRAFT_03907 0.42 +0.2 4,025 - H281DRAFT_03907 0.42 -1.1 4,444 + H281DRAFT_03907 0.86 +0.4 4,444 + H281DRAFT_03907 0.86 +0.0 4,445 - H281DRAFT_03907 0.86 -1.0 4,726 + H281DRAFT_03908 0.23 +0.6 4,727 - H281DRAFT_03908 0.23 +1.3 4,966 + H281DRAFT_03908 0.53 +1.6 4,966 + H281DRAFT_03908 0.53 +0.6 4,966 + H281DRAFT_03908 0.53 +2.2 4,967 - H281DRAFT_03908 0.53 +0.4 5,082 + H281DRAFT_03908 0.68 +0.6 5,085 + H281DRAFT_03908 0.68 +0.1 5,289 + -0.8 5,378 + -0.2 5,458 + +0.9 5,459 - -0.2 5,515 - H281DRAFT_03909 0.12 -0.6 5,540 - H281DRAFT_03909 0.15 +0.1 5,540 - H281DRAFT_03909 0.15 -1.7
Or see this region's nucleotide sequence