Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03082 and H281DRAFT_03083 are separated by 93 nucleotides H281DRAFT_03083 and H281DRAFT_03084 are separated by 348 nucleotides H281DRAFT_03084 and H281DRAFT_03085 are separated by 213 nucleotides H281DRAFT_03085 and H281DRAFT_03086 are separated by 115 nucleotides
H281DRAFT_03082: H281DRAFT_03082 - transcriptional regulator, LysR family, at 111,216 to 112,130
_03082
H281DRAFT_03083: H281DRAFT_03083 - Redoxin, at 112,224 to 112,775
_03083
H281DRAFT_03084: H281DRAFT_03084 - Cytochrome c biogenesis protein CcdA, at 113,124 to 114,920
_03084
H281DRAFT_03085: H281DRAFT_03085 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 115,134 to 115,526
_03085
H281DRAFT_03086: H281DRAFT_03086 - protein of unknown function (DUF4410), at 115,642 to 116,409
_03086
Position (kb)
113
114
115 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 112.349 kb on + strand, within H281DRAFT_03083 at 112.551 kb on - strand at 112.558 kb on + strand, within H281DRAFT_03083 at 112.559 kb on - strand, within H281DRAFT_03083 at 112.559 kb on - strand, within H281DRAFT_03083 at 112.559 kb on - strand, within H281DRAFT_03083 at 112.559 kb on - strand, within H281DRAFT_03083 at 112.791 kb on + strand at 113.062 kb on + strand at 113.063 kb on - strand at 113.134 kb on + strand at 113.917 kb on + strand, within H281DRAFT_03084 at 113.917 kb on + strand, within H281DRAFT_03084 at 113.918 kb on - strand, within H281DRAFT_03084 at 114.066 kb on + strand, within H281DRAFT_03084 at 114.089 kb on + strand, within H281DRAFT_03084 at 114.282 kb on + strand, within H281DRAFT_03084 at 114.283 kb on - strand, within H281DRAFT_03084 at 114.283 kb on - strand, within H281DRAFT_03084 at 114.298 kb on - strand, within H281DRAFT_03084 at 114.558 kb on + strand, within H281DRAFT_03084 at 114.822 kb on + strand at 114.908 kb on + strand at 114.908 kb on + strand at 114.909 kb on - strand at 114.909 kb on - strand at 114.909 kb on - strand at 115.106 kb on + strand at 115.106 kb on + strand at 115.209 kb on + strand, within H281DRAFT_03085 at 115.210 kb on - strand, within H281DRAFT_03085 at 115.228 kb on + strand, within H281DRAFT_03085 at 115.253 kb on + strand, within H281DRAFT_03085 at 115.254 kb on - strand, within H281DRAFT_03085 at 115.304 kb on - strand, within H281DRAFT_03085 at 115.360 kb on - strand, within H281DRAFT_03085 at 115.368 kb on - strand, within H281DRAFT_03085 at 115.373 kb on + strand, within H281DRAFT_03085 at 115.807 kb on - strand, within H281DRAFT_03086 at 115.917 kb on + strand, within H281DRAFT_03086 at 115.919 kb on + strand, within H281DRAFT_03086 at 115.919 kb on + strand, within H281DRAFT_03086
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 112,349 + H281DRAFT_03083 0.23 -0.5 112,551 - +1.8 112,558 + H281DRAFT_03083 0.61 -1.2 112,559 - H281DRAFT_03083 0.61 +0.1 112,559 - H281DRAFT_03083 0.61 -0.2 112,559 - H281DRAFT_03083 0.61 -0.7 112,559 - H281DRAFT_03083 0.61 -0.4 112,791 + -1.1 113,062 + +0.0 113,063 - +0.6 113,134 + +0.0 113,917 + H281DRAFT_03084 0.44 -0.1 113,917 + H281DRAFT_03084 0.44 +1.0 113,918 - H281DRAFT_03084 0.44 +0.8 114,066 + H281DRAFT_03084 0.52 +0.0 114,089 + H281DRAFT_03084 0.54 +0.3 114,282 + H281DRAFT_03084 0.64 -0.5 114,283 - H281DRAFT_03084 0.64 +0.9 114,283 - H281DRAFT_03084 0.64 +1.0 114,298 - H281DRAFT_03084 0.65 +0.4 114,558 + H281DRAFT_03084 0.80 +0.1 114,822 + +0.1 114,908 + +0.2 114,908 + +0.8 114,909 - +0.0 114,909 - +0.3 114,909 - -0.4 115,106 + +0.3 115,106 + -0.7 115,209 + H281DRAFT_03085 0.19 -1.0 115,210 - H281DRAFT_03085 0.19 +0.1 115,228 + H281DRAFT_03085 0.24 +0.1 115,253 + H281DRAFT_03085 0.30 +0.3 115,254 - H281DRAFT_03085 0.31 +0.5 115,304 - H281DRAFT_03085 0.43 +0.3 115,360 - H281DRAFT_03085 0.58 -1.4 115,368 - H281DRAFT_03085 0.60 +0.6 115,373 + H281DRAFT_03085 0.61 -1.1 115,807 - H281DRAFT_03086 0.21 +0.8 115,917 + H281DRAFT_03086 0.36 -0.3 115,919 + H281DRAFT_03086 0.36 -1.9 115,919 + H281DRAFT_03086 0.36 -0.4
Or see this region's nucleotide sequence