Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03036

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03035 and H281DRAFT_03036 are separated by 131 nucleotidesH281DRAFT_03036 and H281DRAFT_03037 are separated by 23 nucleotidesH281DRAFT_03037 and H281DRAFT_03038 are separated by 48 nucleotides H281DRAFT_03035: H281DRAFT_03035 - hydroxybutyrate-dimer hydrolase, at 64,865 to 66,964 _03035 H281DRAFT_03036: H281DRAFT_03036 - hypothetical protein, at 67,096 to 67,338 _03036 H281DRAFT_03037: H281DRAFT_03037 - Exodeoxyribonuclease III (EC 3.1.11.2), at 67,362 to 68,171 _03037 H281DRAFT_03038: H281DRAFT_03038 - chemotaxis protein MotB, at 68,220 to 69,206 _03038 Position (kb) 67 68Strain fitness (log2 ratio) -2 -1 0 1 2at 66.170 kb on + strand, within H281DRAFT_03035at 66.254 kb on + strand, within H281DRAFT_03035at 66.255 kb on - strand, within H281DRAFT_03035at 66.410 kb on + strand, within H281DRAFT_03035at 66.490 kb on + strand, within H281DRAFT_03035at 66.490 kb on + strand, within H281DRAFT_03035at 66.491 kb on - strand, within H281DRAFT_03035at 66.756 kb on - strandat 66.758 kb on + strandat 66.835 kb on + strandat 66.835 kb on + strandat 66.836 kb on - strandat 67.024 kb on + strandat 67.057 kb on + strandat 67.057 kb on + strandat 67.109 kb on - strandat 67.160 kb on - strand, within H281DRAFT_03036at 67.686 kb on + strand, within H281DRAFT_03037at 67.728 kb on + strand, within H281DRAFT_03037at 67.729 kb on - strand, within H281DRAFT_03037at 67.842 kb on + strand, within H281DRAFT_03037at 67.842 kb on + strand, within H281DRAFT_03037at 67.842 kb on + strand, within H281DRAFT_03037at 67.843 kb on - strand, within H281DRAFT_03037at 67.966 kb on - strand, within H281DRAFT_03037at 67.967 kb on + strand, within H281DRAFT_03037at 67.967 kb on + strand, within H281DRAFT_03037at 67.967 kb on + strand, within H281DRAFT_03037at 67.980 kb on + strand, within H281DRAFT_03037at 68.028 kb on - strand, within H281DRAFT_03037at 68.229 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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66,170 + H281DRAFT_03035 0.62 +0.1
66,254 + H281DRAFT_03035 0.66 +0.1
66,255 - H281DRAFT_03035 0.66 -0.2
66,410 + H281DRAFT_03035 0.74 +1.2
66,490 + H281DRAFT_03035 0.77 -2.4
66,490 + H281DRAFT_03035 0.77 -0.1
66,491 - H281DRAFT_03035 0.77 +0.2
66,756 - -0.2
66,758 + -1.1
66,835 + +0.0
66,835 + +1.4
66,836 - +2.1
67,024 + -0.0
67,057 + -0.1
67,057 + -0.1
67,109 - +0.4
67,160 - H281DRAFT_03036 0.26 +0.6
67,686 + H281DRAFT_03037 0.40 +0.7
67,728 + H281DRAFT_03037 0.45 -0.6
67,729 - H281DRAFT_03037 0.45 -0.3
67,842 + H281DRAFT_03037 0.59 +0.0
67,842 + H281DRAFT_03037 0.59 +0.7
67,842 + H281DRAFT_03037 0.59 +1.4
67,843 - H281DRAFT_03037 0.59 -0.1
67,966 - H281DRAFT_03037 0.75 +0.5
67,967 + H281DRAFT_03037 0.75 -0.2
67,967 + H281DRAFT_03037 0.75 +0.8
67,967 + H281DRAFT_03037 0.75 +0.0
67,980 + H281DRAFT_03037 0.76 +0.4
68,028 - H281DRAFT_03037 0.82 +1.2
68,229 + -0.4

Or see this region's nucleotide sequence