Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02932 and H281DRAFT_02933 are separated by 159 nucleotides H281DRAFT_02933 and H281DRAFT_02934 are separated by 31 nucleotides H281DRAFT_02934 and H281DRAFT_02935 are separated by 119 nucleotides
H281DRAFT_02932: H281DRAFT_02932 - Major Facilitator Superfamily protein, at 543,230 to 543,679
_02932
H281DRAFT_02933: H281DRAFT_02933 - Tetratricopeptide repeat-containing protein, at 543,839 to 544,753
_02933
H281DRAFT_02934: H281DRAFT_02934 - hypothetical protein, at 544,785 to 545,087
_02934
H281DRAFT_02935: H281DRAFT_02935 - ATP-dependent transcriptional regulator, at 545,207 to 548,404
_02935
Position (kb) 543
544
545 Strain fitness (log2 ratio) -1
0
1
2 at 543.000 kb on + strand at 543.000 kb on + strand at 543.001 kb on - strand at 543.082 kb on - strand at 543.082 kb on - strand at 543.177 kb on + strand at 543.201 kb on + strand at 543.416 kb on - strand, within H281DRAFT_02932 at 543.461 kb on + strand, within H281DRAFT_02932 at 543.461 kb on + strand, within H281DRAFT_02932 at 543.558 kb on - strand, within H281DRAFT_02932 at 543.571 kb on - strand, within H281DRAFT_02932 at 543.571 kb on - strand, within H281DRAFT_02932 at 543.630 kb on + strand, within H281DRAFT_02932 at 543.631 kb on - strand, within H281DRAFT_02932 at 543.631 kb on - strand, within H281DRAFT_02932 at 543.631 kb on - strand, within H281DRAFT_02932 at 543.633 kb on + strand, within H281DRAFT_02932 at 543.633 kb on + strand, within H281DRAFT_02932 at 543.634 kb on - strand, within H281DRAFT_02932 at 543.634 kb on - strand, within H281DRAFT_02932 at 543.778 kb on + strand at 543.778 kb on + strand at 543.778 kb on + strand at 543.779 kb on - strand at 543.779 kb on - strand at 543.840 kb on + strand at 543.841 kb on - strand at 543.853 kb on + strand at 543.882 kb on - strand at 543.882 kb on - strand at 543.985 kb on + strand, within H281DRAFT_02933 at 543.985 kb on + strand, within H281DRAFT_02933 at 543.985 kb on + strand, within H281DRAFT_02933 at 543.985 kb on + strand, within H281DRAFT_02933 at 543.985 kb on + strand, within H281DRAFT_02933 at 543.985 kb on + strand, within H281DRAFT_02933 at 543.986 kb on - strand, within H281DRAFT_02933 at 543.986 kb on - strand, within H281DRAFT_02933 at 543.986 kb on - strand, within H281DRAFT_02933 at 543.986 kb on - strand, within H281DRAFT_02933 at 543.986 kb on - strand, within H281DRAFT_02933 at 543.986 kb on - strand, within H281DRAFT_02933 at 543.987 kb on + strand, within H281DRAFT_02933 at 543.987 kb on + strand, within H281DRAFT_02933 at 543.988 kb on - strand, within H281DRAFT_02933 at 544.082 kb on + strand, within H281DRAFT_02933 at 544.190 kb on + strand, within H281DRAFT_02933 at 544.193 kb on - strand, within H281DRAFT_02933 at 544.193 kb on - strand, within H281DRAFT_02933 at 544.193 kb on - strand, within H281DRAFT_02933 at 544.445 kb on - strand, within H281DRAFT_02933 at 544.459 kb on - strand, within H281DRAFT_02933 at 544.459 kb on - strand, within H281DRAFT_02933 at 544.577 kb on - strand, within H281DRAFT_02933 at 544.582 kb on + strand, within H281DRAFT_02933 at 544.582 kb on + strand, within H281DRAFT_02933 at 544.586 kb on + strand, within H281DRAFT_02933 at 544.587 kb on - strand, within H281DRAFT_02933 at 544.643 kb on + strand, within H281DRAFT_02933 at 544.669 kb on - strand at 544.746 kb on + strand at 544.746 kb on + strand at 544.939 kb on + strand at 544.941 kb on + strand, within H281DRAFT_02934 at 544.942 kb on - strand, within H281DRAFT_02934 at 544.942 kb on - strand, within H281DRAFT_02934 at 544.989 kb on + strand, within H281DRAFT_02934 at 545.057 kb on + strand at 545.058 kb on - strand at 545.058 kb on - strand at 545.471 kb on - strand at 545.471 kb on - strand at 545.600 kb on + strand, within H281DRAFT_02935 at 545.600 kb on + strand, within H281DRAFT_02935 at 545.601 kb on - strand, within H281DRAFT_02935 at 545.647 kb on + strand, within H281DRAFT_02935 at 545.720 kb on + strand, within H281DRAFT_02935 at 545.721 kb on - strand, within H281DRAFT_02935
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 543,000 + +0.5 543,000 + -1.2 543,001 - +1.3 543,082 - +0.4 543,082 - +1.1 543,177 + +0.1 543,201 + -0.5 543,416 - H281DRAFT_02932 0.41 +0.1 543,461 + H281DRAFT_02932 0.51 -0.1 543,461 + H281DRAFT_02932 0.51 -0.3 543,558 - H281DRAFT_02932 0.73 +0.4 543,571 - H281DRAFT_02932 0.76 +0.2 543,571 - H281DRAFT_02932 0.76 -0.1 543,630 + H281DRAFT_02932 0.89 -0.9 543,631 - H281DRAFT_02932 0.89 +0.6 543,631 - H281DRAFT_02932 0.89 +0.3 543,631 - H281DRAFT_02932 0.89 +0.2 543,633 + H281DRAFT_02932 0.90 +1.8 543,633 + H281DRAFT_02932 0.90 +0.0 543,634 - H281DRAFT_02932 0.90 -0.3 543,634 - H281DRAFT_02932 0.90 +0.4 543,778 + +0.4 543,778 + +1.4 543,778 + -1.5 543,779 - -0.7 543,779 - +0.5 543,840 + -0.4 543,841 - -0.0 543,853 + +0.1 543,882 - +0.2 543,882 - +1.0 543,985 + H281DRAFT_02933 0.16 -0.1 543,985 + H281DRAFT_02933 0.16 -0.4 543,985 + H281DRAFT_02933 0.16 -0.1 543,985 + H281DRAFT_02933 0.16 -0.1 543,985 + H281DRAFT_02933 0.16 -0.0 543,985 + H281DRAFT_02933 0.16 +0.5 543,986 - H281DRAFT_02933 0.16 +0.2 543,986 - H281DRAFT_02933 0.16 -0.5 543,986 - H281DRAFT_02933 0.16 +0.1 543,986 - H281DRAFT_02933 0.16 +0.5 543,986 - H281DRAFT_02933 0.16 +0.8 543,986 - H281DRAFT_02933 0.16 -0.1 543,987 + H281DRAFT_02933 0.16 +0.3 543,987 + H281DRAFT_02933 0.16 +0.1 543,988 - H281DRAFT_02933 0.16 +0.1 544,082 + H281DRAFT_02933 0.27 -0.7 544,190 + H281DRAFT_02933 0.38 +0.8 544,193 - H281DRAFT_02933 0.39 +1.4 544,193 - H281DRAFT_02933 0.39 +0.7 544,193 - H281DRAFT_02933 0.39 +0.1 544,445 - H281DRAFT_02933 0.66 +0.4 544,459 - H281DRAFT_02933 0.68 -1.5 544,459 - H281DRAFT_02933 0.68 -0.7 544,577 - H281DRAFT_02933 0.81 +1.0 544,582 + H281DRAFT_02933 0.81 -1.1 544,582 + H281DRAFT_02933 0.81 +0.4 544,586 + H281DRAFT_02933 0.82 -0.8 544,587 - H281DRAFT_02933 0.82 +1.7 544,643 + H281DRAFT_02933 0.88 +0.2 544,669 - +0.6 544,746 + -0.3 544,746 + +0.5 544,939 + +2.5 544,941 + H281DRAFT_02934 0.51 -0.0 544,942 - H281DRAFT_02934 0.52 -0.5 544,942 - H281DRAFT_02934 0.52 -0.3 544,989 + H281DRAFT_02934 0.67 -0.6 545,057 + +0.5 545,058 - +1.1 545,058 - +0.5 545,471 - +1.1 545,471 - -0.4 545,600 + H281DRAFT_02935 0.12 +0.5 545,600 + H281DRAFT_02935 0.12 +1.6 545,601 - H281DRAFT_02935 0.12 +0.3 545,647 + H281DRAFT_02935 0.14 +0.6 545,720 + H281DRAFT_02935 0.16 +0.2 545,721 - H281DRAFT_02935 0.16 -0.0
Or see this region's nucleotide sequence