Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02850

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02849 and H281DRAFT_02850 are separated by 134 nucleotidesH281DRAFT_02850 and H281DRAFT_02851 overlap by 4 nucleotidesH281DRAFT_02851 and H281DRAFT_02852 are separated by 94 nucleotides H281DRAFT_02849: H281DRAFT_02849 - Pimeloyl-ACP methyl ester carboxylesterase, at 442,196 to 443,350 _02849 H281DRAFT_02850: H281DRAFT_02850 - holin-like protein, at 443,485 to 443,856 _02850 H281DRAFT_02851: H281DRAFT_02851 - TIGR00659 family protein, at 443,853 to 444,593 _02851 H281DRAFT_02852: H281DRAFT_02852 - porin, GBP family, at 444,688 to 445,833 _02852 Position (kb) 443 444Strain fitness (log2 ratio) -1 0 1at 443.060 kb on - strand, within H281DRAFT_02849at 443.060 kb on - strand, within H281DRAFT_02849at 443.200 kb on - strand, within H281DRAFT_02849at 443.434 kb on + strandat 443.445 kb on + strandat 443.483 kb on - strandat 443.511 kb on + strandat 444.340 kb on + strand, within H281DRAFT_02851at 444.819 kb on - strand, within H281DRAFT_02852at 444.819 kb on - strand, within H281DRAFT_02852

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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443,060 - H281DRAFT_02849 0.75 -0.2
443,060 - H281DRAFT_02849 0.75 +0.9
443,200 - H281DRAFT_02849 0.87 -0.7
443,434 + +1.5
443,445 + -0.0
443,483 - -0.8
443,511 + +0.5
444,340 + H281DRAFT_02851 0.66 +1.2
444,819 - H281DRAFT_02852 0.11 -0.3
444,819 - H281DRAFT_02852 0.11 -0.2

Or see this region's nucleotide sequence