Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02788 and H281DRAFT_02789 are separated by 90 nucleotides H281DRAFT_02789 and H281DRAFT_02790 are separated by 10 nucleotides H281DRAFT_02790 and H281DRAFT_02791 are separated by 204 nucleotides
H281DRAFT_02788: H281DRAFT_02788 - Acyl-CoA dehydrogenase, at 377,641 to 378,906
_02788
H281DRAFT_02789: H281DRAFT_02789 - hypothetical protein, at 378,997 to 379,515
_02789
H281DRAFT_02790: H281DRAFT_02790 - hypothetical protein, at 379,526 to 380,227
_02790
H281DRAFT_02791: H281DRAFT_02791 - apolipoprotein D and lipocalin family protein, at 380,432 to 381,004
_02791
Position (kb) 378
379
380 Strain fitness (log2 ratio) -1
0
1 at 378.039 kb on - strand, within H281DRAFT_02788 at 378.136 kb on + strand, within H281DRAFT_02788 at 378.152 kb on + strand, within H281DRAFT_02788 at 378.305 kb on + strand, within H281DRAFT_02788 at 378.379 kb on + strand, within H281DRAFT_02788 at 378.460 kb on - strand, within H281DRAFT_02788 at 379.126 kb on - strand, within H281DRAFT_02789 at 379.273 kb on + strand, within H281DRAFT_02789 at 379.276 kb on - strand, within H281DRAFT_02789 at 379.276 kb on - strand, within H281DRAFT_02789 at 379.556 kb on + strand at 380.315 kb on - strand at 380.315 kb on - strand at 380.320 kb on - strand at 380.471 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 378,039 - H281DRAFT_02788 0.31 -0.3 378,136 + H281DRAFT_02788 0.39 -0.1 378,152 + H281DRAFT_02788 0.40 -0.2 378,305 + H281DRAFT_02788 0.52 -0.0 378,379 + H281DRAFT_02788 0.58 +0.5 378,460 - H281DRAFT_02788 0.65 +0.3 379,126 - H281DRAFT_02789 0.25 +0.8 379,273 + H281DRAFT_02789 0.53 -0.0 379,276 - H281DRAFT_02789 0.54 -1.2 379,276 - H281DRAFT_02789 0.54 +0.3 379,556 + +0.3 380,315 - +0.1 380,315 - -0.4 380,320 - +0.3 380,471 - -0.7
Or see this region's nucleotide sequence