Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02155 and H281DRAFT_02156 are separated by 90 nucleotides H281DRAFT_02156 and H281DRAFT_02157 are separated by 148 nucleotides H281DRAFT_02157 and H281DRAFT_02158 are separated by 297 nucleotides H281DRAFT_02158 and H281DRAFT_02159 are separated by 397 nucleotides
H281DRAFT_02155: H281DRAFT_02155 - hypothetical protein, at 294,739 to 295,368
_02155
H281DRAFT_02156: H281DRAFT_02156 - transcriptional regulator, AsnC family, at 295,459 to 295,917
_02156
H281DRAFT_02157: H281DRAFT_02157 - cation diffusion facilitator family transporter, at 296,066 to 297,304
_02157
H281DRAFT_02158: H281DRAFT_02158 - DNA-binding protein H-NS, at 297,602 to 297,904
_02158
H281DRAFT_02159: H281DRAFT_02159 - hypothetical protein, at 298,302 to 298,964
_02159
Position (kb) 296
297
298 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 295.075 kb on + strand, within H281DRAFT_02155 at 295.076 kb on - strand, within H281DRAFT_02155 at 295.076 kb on - strand, within H281DRAFT_02155 at 295.076 kb on - strand, within H281DRAFT_02155 at 295.218 kb on + strand, within H281DRAFT_02155 at 295.218 kb on + strand, within H281DRAFT_02155 at 295.219 kb on - strand, within H281DRAFT_02155 at 295.219 kb on - strand, within H281DRAFT_02155 at 295.319 kb on + strand at 295.366 kb on + strand at 295.366 kb on + strand at 295.421 kb on + strand at 295.434 kb on + strand at 295.470 kb on + strand at 295.471 kb on - strand at 295.505 kb on + strand, within H281DRAFT_02156 at 295.505 kb on + strand, within H281DRAFT_02156 at 295.506 kb on - strand, within H281DRAFT_02156 at 295.612 kb on + strand, within H281DRAFT_02156 at 295.612 kb on + strand, within H281DRAFT_02156 at 295.612 kb on + strand, within H281DRAFT_02156 at 295.613 kb on - strand, within H281DRAFT_02156 at 295.750 kb on + strand, within H281DRAFT_02156 at 295.750 kb on + strand, within H281DRAFT_02156 at 295.751 kb on - strand, within H281DRAFT_02156 at 295.751 kb on - strand, within H281DRAFT_02156 at 295.774 kb on + strand, within H281DRAFT_02156 at 295.774 kb on + strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.810 kb on + strand, within H281DRAFT_02156 at 295.810 kb on + strand, within H281DRAFT_02156 at 295.862 kb on + strand, within H281DRAFT_02156 at 295.863 kb on - strand, within H281DRAFT_02156 at 295.863 kb on - strand, within H281DRAFT_02156 at 295.907 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.949 kb on - strand at 295.949 kb on - strand at 295.949 kb on - strand at 295.949 kb on - strand at 295.967 kb on + strand at 296.067 kb on + strand at 296.067 kb on + strand at 296.067 kb on + strand at 296.068 kb on - strand at 296.068 kb on - strand at 296.068 kb on - strand at 296.068 kb on - strand at 296.168 kb on + strand at 296.168 kb on + strand at 296.169 kb on - strand at 296.307 kb on + strand, within H281DRAFT_02157 at 296.307 kb on + strand, within H281DRAFT_02157 at 296.307 kb on + strand, within H281DRAFT_02157 at 296.308 kb on - strand, within H281DRAFT_02157 at 296.499 kb on + strand, within H281DRAFT_02157 at 296.499 kb on + strand, within H281DRAFT_02157 at 296.499 kb on + strand, within H281DRAFT_02157 at 296.500 kb on - strand, within H281DRAFT_02157 at 296.500 kb on - strand, within H281DRAFT_02157 at 296.500 kb on - strand, within H281DRAFT_02157 at 296.500 kb on - strand at 296.500 kb on - strand, within H281DRAFT_02157 at 296.539 kb on + strand at 296.539 kb on + strand, within H281DRAFT_02157 at 296.539 kb on + strand, within H281DRAFT_02157 at 296.539 kb on + strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.583 kb on - strand, within H281DRAFT_02157 at 296.708 kb on - strand, within H281DRAFT_02157 at 296.883 kb on + strand, within H281DRAFT_02157 at 296.883 kb on + strand, within H281DRAFT_02157 at 297.035 kb on + strand, within H281DRAFT_02157 at 297.036 kb on - strand, within H281DRAFT_02157 at 297.036 kb on - strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.062 kb on - strand, within H281DRAFT_02157 at 297.062 kb on - strand, within H281DRAFT_02157 at 297.069 kb on + strand, within H281DRAFT_02157 at 297.070 kb on - strand, within H281DRAFT_02157 at 297.221 kb on + strand at 297.238 kb on + strand at 297.250 kb on + strand at 297.251 kb on - strand at 297.251 kb on - strand at 297.331 kb on + strand at 297.331 kb on + strand at 297.331 kb on + strand at 297.332 kb on - strand at 297.356 kb on - strand at 297.438 kb on - strand at 297.466 kb on - strand at 297.553 kb on + strand at 297.578 kb on + strand at 297.579 kb on - strand at 297.700 kb on - strand, within H281DRAFT_02158 at 297.746 kb on - strand, within H281DRAFT_02158 at 297.895 kb on - strand at 297.904 kb on + strand at 297.905 kb on - strand at 297.927 kb on - strand at 298.037 kb on - strand at 298.040 kb on - strand at 298.040 kb on - strand at 298.040 kb on - strand at 298.102 kb on - strand at 298.141 kb on - strand at 298.145 kb on - strand at 298.153 kb on - strand at 298.220 kb on + strand at 298.232 kb on + strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.238 kb on - strand at 298.296 kb on - strand at 298.303 kb on + strand at 298.304 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 295,075 + H281DRAFT_02155 0.53 -0.4 295,076 - H281DRAFT_02155 0.53 -0.0 295,076 - H281DRAFT_02155 0.53 -0.5 295,076 - H281DRAFT_02155 0.53 -0.8 295,218 + H281DRAFT_02155 0.76 +0.1 295,218 + H281DRAFT_02155 0.76 -0.5 295,219 - H281DRAFT_02155 0.76 -1.4 295,219 - H281DRAFT_02155 0.76 -0.3 295,319 + +0.2 295,366 + +0.4 295,366 + -0.9 295,421 + -0.4 295,434 + +0.4 295,470 + +0.4 295,471 - +0.9 295,505 + H281DRAFT_02156 0.10 +0.4 295,505 + H281DRAFT_02156 0.10 +1.9 295,506 - H281DRAFT_02156 0.10 +1.0 295,612 + H281DRAFT_02156 0.33 +0.4 295,612 + H281DRAFT_02156 0.33 -0.6 295,612 + H281DRAFT_02156 0.33 +0.2 295,613 - H281DRAFT_02156 0.34 +2.1 295,750 + H281DRAFT_02156 0.63 +0.9 295,750 + H281DRAFT_02156 0.63 -1.6 295,751 - H281DRAFT_02156 0.64 +1.1 295,751 - H281DRAFT_02156 0.64 -0.3 295,774 + H281DRAFT_02156 0.69 +0.3 295,774 + H281DRAFT_02156 0.69 +0.1 295,775 - H281DRAFT_02156 0.69 +0.3 295,775 - H281DRAFT_02156 0.69 +0.8 295,775 - H281DRAFT_02156 0.69 +0.7 295,775 - H281DRAFT_02156 0.69 +0.6 295,775 - H281DRAFT_02156 0.69 -0.9 295,810 + H281DRAFT_02156 0.76 +0.9 295,810 + H281DRAFT_02156 0.76 -0.0 295,862 + H281DRAFT_02156 0.88 +1.4 295,863 - H281DRAFT_02156 0.88 +0.7 295,863 - H281DRAFT_02156 0.88 +0.6 295,907 + -0.7 295,948 + +0.6 295,948 + -0.7 295,948 + -0.1 295,948 + -0.5 295,948 + +0.4 295,949 - +0.4 295,949 - -0.3 295,949 - +0.3 295,949 - +0.1 295,967 + -0.1 296,067 + +0.7 296,067 + +0.1 296,067 + -1.3 296,068 - +0.4 296,068 - +1.3 296,068 - +0.5 296,068 - -0.6 296,168 + +0.3 296,168 + +0.8 296,169 - +0.8 296,307 + H281DRAFT_02157 0.19 +0.8 296,307 + H281DRAFT_02157 0.19 -0.8 296,307 + H281DRAFT_02157 0.19 -0.8 296,308 - H281DRAFT_02157 0.20 -0.3 296,499 + H281DRAFT_02157 0.35 -0.3 296,499 + H281DRAFT_02157 0.35 -0.3 296,499 + H281DRAFT_02157 0.35 -1.2 296,500 - H281DRAFT_02157 0.35 -0.7 296,500 - H281DRAFT_02157 0.35 +0.4 296,500 - H281DRAFT_02157 0.35 +0.6 296,500 - +1.1 296,500 - H281DRAFT_02157 0.35 -0.3 296,539 + +3.4 296,539 + H281DRAFT_02157 0.38 +0.3 296,539 + H281DRAFT_02157 0.38 +1.8 296,539 + H281DRAFT_02157 0.38 -0.2 296,540 - H281DRAFT_02157 0.38 +0.9 296,540 - H281DRAFT_02157 0.38 +0.9 296,540 - H281DRAFT_02157 0.38 -0.8 296,540 - H281DRAFT_02157 0.38 +0.6 296,540 - H281DRAFT_02157 0.38 +0.1 296,583 - H281DRAFT_02157 0.42 +1.9 296,708 - H281DRAFT_02157 0.52 +1.3 296,883 + H281DRAFT_02157 0.66 -0.4 296,883 + H281DRAFT_02157 0.66 -0.7 297,035 + H281DRAFT_02157 0.78 +0.3 297,036 - H281DRAFT_02157 0.78 +0.7 297,036 - H281DRAFT_02157 0.78 +2.1 297,061 + H281DRAFT_02157 0.80 +0.1 297,061 + H281DRAFT_02157 0.80 +0.9 297,061 + H281DRAFT_02157 0.80 +0.4 297,061 + H281DRAFT_02157 0.80 -0.5 297,061 + H281DRAFT_02157 0.80 -0.4 297,062 - H281DRAFT_02157 0.80 +0.3 297,062 - H281DRAFT_02157 0.80 +0.6 297,069 + H281DRAFT_02157 0.81 +0.3 297,070 - H281DRAFT_02157 0.81 +0.1 297,221 + -0.3 297,238 + -0.2 297,250 + -1.4 297,251 - +0.3 297,251 - +1.4 297,331 + -0.2 297,331 + -0.1 297,331 + -0.7 297,332 - +0.8 297,356 - -0.3 297,438 - +0.1 297,466 - +0.2 297,553 + -0.8 297,578 + +0.0 297,579 - +1.2 297,700 - H281DRAFT_02158 0.32 +0.8 297,746 - H281DRAFT_02158 0.48 +1.4 297,895 - +0.5 297,904 + -0.7 297,905 - -0.8 297,927 - -2.9 298,037 - -0.8 298,040 - -0.3 298,040 - -1.1 298,040 - -1.2 298,102 - -0.3 298,141 - -0.6 298,145 - -0.7 298,153 - -0.4 298,220 + +0.6 298,232 + -1.5 298,233 - -1.2 298,233 - -0.3 298,233 - -0.8 298,233 - -1.4 298,233 - -0.5 298,238 - +0.6 298,296 - +0.2 298,303 + -1.3 298,304 - -0.7
Or see this region's nucleotide sequence