Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02144 and H281DRAFT_02145 are separated by 281 nucleotides H281DRAFT_02145 and H281DRAFT_02146 are separated by 349 nucleotides
H281DRAFT_02144: H281DRAFT_02144 - hypothetical protein, at 285,631 to 287,049
_02144
H281DRAFT_02145: H281DRAFT_02145 - hypothetical protein, at 287,331 to 287,441
_02145
H281DRAFT_02146: H281DRAFT_02146 - Integrase, at 287,791 to 289,005
_02146
Position (kb) 287
288 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.380 kb on + strand, within H281DRAFT_02144 at 286.381 kb on - strand, within H281DRAFT_02144 at 286.381 kb on - strand, within H281DRAFT_02144 at 286.684 kb on + strand, within H281DRAFT_02144 at 286.909 kb on + strand at 286.909 kb on + strand at 286.909 kb on + strand at 286.909 kb on + strand at 286.961 kb on + strand at 286.961 kb on + strand at 286.961 kb on + strand at 286.962 kb on - strand at 287.049 kb on + strand at 287.050 kb on - strand at 287.050 kb on - strand at 287.107 kb on + strand at 287.141 kb on + strand at 287.163 kb on + strand at 287.264 kb on - strand at 287.304 kb on + strand at 287.320 kb on - strand at 287.393 kb on - strand, within H281DRAFT_02145 at 287.559 kb on + strand at 287.559 kb on + strand at 287.559 kb on + strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.560 kb on - strand at 287.583 kb on + strand at 287.653 kb on + strand at 287.653 kb on + strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.654 kb on - strand at 287.662 kb on - strand at 287.662 kb on - strand at 287.662 kb on - strand at 287.739 kb on + strand at 287.740 kb on - strand at 287.775 kb on + strand at 287.850 kb on - strand at 287.850 kb on - strand at 287.906 kb on + strand at 287.906 kb on + strand at 287.906 kb on + strand at 287.907 kb on - strand at 287.907 kb on - strand at 287.907 kb on - strand at 287.913 kb on + strand, within H281DRAFT_02146 at 287.914 kb on - strand, within H281DRAFT_02146 at 288.111 kb on + strand, within H281DRAFT_02146 at 288.112 kb on - strand, within H281DRAFT_02146 at 288.184 kb on + strand, within H281DRAFT_02146 at 288.185 kb on - strand, within H281DRAFT_02146 at 288.217 kb on - strand, within H281DRAFT_02146 at 288.217 kb on - strand, within H281DRAFT_02146 at 288.217 kb on - strand, within H281DRAFT_02146 at 288.217 kb on - strand, within H281DRAFT_02146 at 288.217 kb on - strand, within H281DRAFT_02146 at 288.218 kb on + strand, within H281DRAFT_02146 at 288.219 kb on - strand, within H281DRAFT_02146 at 288.219 kb on - strand, within H281DRAFT_02146
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 286,380 + H281DRAFT_02144 0.53 -1.1 286,380 + H281DRAFT_02144 0.53 -1.3 286,380 + H281DRAFT_02144 0.53 -1.8 286,381 - H281DRAFT_02144 0.53 +0.0 286,381 - H281DRAFT_02144 0.53 -0.4 286,684 + H281DRAFT_02144 0.74 -0.2 286,909 + -0.8 286,909 + +0.1 286,909 + +0.1 286,909 + -0.9 286,961 + +0.3 286,961 + +1.4 286,961 + -0.8 286,962 - -0.5 287,049 + +0.8 287,050 - +0.4 287,050 - -0.8 287,107 + -0.3 287,141 + +0.8 287,163 + -2.1 287,264 - -0.0 287,304 + -0.5 287,320 - -0.4 287,393 - H281DRAFT_02145 0.56 -1.5 287,559 + +0.9 287,559 + +0.5 287,559 + -0.3 287,560 - -0.2 287,560 - -0.7 287,560 - -0.2 287,560 - +0.2 287,560 - +0.1 287,583 + -0.3 287,653 + +0.8 287,653 + -0.7 287,654 - +0.1 287,654 - -0.3 287,654 - -0.3 287,654 - +0.7 287,654 - +0.3 287,654 - +1.4 287,654 - -0.3 287,654 - +1.0 287,662 - +0.8 287,662 - -0.3 287,662 - +3.1 287,739 + +0.2 287,740 - -0.3 287,775 + +2.6 287,850 - +0.6 287,850 - -0.2 287,906 + -0.2 287,906 + +0.3 287,906 + -1.2 287,907 - -0.4 287,907 - +0.8 287,907 - +0.5 287,913 + H281DRAFT_02146 0.10 +0.0 287,914 - H281DRAFT_02146 0.10 +1.9 288,111 + H281DRAFT_02146 0.26 +1.3 288,112 - H281DRAFT_02146 0.26 +0.3 288,184 + H281DRAFT_02146 0.32 -0.1 288,185 - H281DRAFT_02146 0.32 +0.3 288,217 - H281DRAFT_02146 0.35 +0.3 288,217 - H281DRAFT_02146 0.35 +0.9 288,217 - H281DRAFT_02146 0.35 -1.2 288,217 - H281DRAFT_02146 0.35 +0.7 288,217 - H281DRAFT_02146 0.35 -1.2 288,218 + H281DRAFT_02146 0.35 -1.3 288,219 - H281DRAFT_02146 0.35 -1.3 288,219 - H281DRAFT_02146 0.35 +0.1
Or see this region's nucleotide sequence