Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01375 and H281DRAFT_01376 are separated by 72 nucleotides H281DRAFT_01376 and H281DRAFT_01377 are separated by 331 nucleotides H281DRAFT_01377 and H281DRAFT_01378 are separated by 62 nucleotides H281DRAFT_01378 and H281DRAFT_01379 are separated by 77 nucleotides
H281DRAFT_01375: H281DRAFT_01375 - LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway, at 219,702 to 221,024
_01375
H281DRAFT_01376: H281DRAFT_01376 - 4-oxalomesaconate tautomerase, at 221,097 to 222,203
_01376
H281DRAFT_01377: H281DRAFT_01377 - hypothetical protein, at 222,535 to 222,825
_01377
H281DRAFT_01378: H281DRAFT_01378 - hypothetical protein, at 222,888 to 223,031
_01378
H281DRAFT_01379: H281DRAFT_01379 - diguanylate cyclase/phosphodiesterase, at 223,109 to 225,451
_01379
Position (kb) 221
222
223 Strain fitness (log2 ratio) -1
0
1 at 220.149 kb on - strand, within H281DRAFT_01375 at 220.149 kb on - strand, within H281DRAFT_01375 at 220.149 kb on - strand, within H281DRAFT_01375 at 220.483 kb on - strand, within H281DRAFT_01375 at 221.761 kb on + strand, within H281DRAFT_01376 at 221.762 kb on - strand, within H281DRAFT_01376 at 221.966 kb on - strand, within H281DRAFT_01376 at 221.966 kb on - strand, within H281DRAFT_01376 at 221.966 kb on - strand, within H281DRAFT_01376 at 222.268 kb on - strand at 222.466 kb on + strand at 222.692 kb on - strand, within H281DRAFT_01377 at 222.837 kb on + strand at 222.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 220,149 - H281DRAFT_01375 0.34 -0.4 220,149 - H281DRAFT_01375 0.34 -0.3 220,149 - H281DRAFT_01375 0.34 -0.3 220,483 - H281DRAFT_01375 0.59 -1.0 221,761 + H281DRAFT_01376 0.60 +0.7 221,762 - H281DRAFT_01376 0.60 +0.2 221,966 - H281DRAFT_01376 0.79 +0.3 221,966 - H281DRAFT_01376 0.79 -0.2 221,966 - H281DRAFT_01376 0.79 -0.3 222,268 - +1.3 222,466 + -0.0 222,692 - H281DRAFT_01377 0.54 +0.8 222,837 + +0.2 222,838 - +1.5
Or see this region's nucleotide sequence