Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01338 and H281DRAFT_01339 are separated by 179 nucleotides H281DRAFT_01339 and H281DRAFT_01340 overlap by 4 nucleotides H281DRAFT_01340 and H281DRAFT_01341 are separated by 223 nucleotides
H281DRAFT_01338: H281DRAFT_01338 - outer membrane transport energization protein ExbB, at 180,223 to 180,939
_01338
H281DRAFT_01339: H281DRAFT_01339 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 181,119 to 181,889
_01339
H281DRAFT_01340: H281DRAFT_01340 - phosphoglycolate phosphatase, at 181,886 to 182,578
_01340
H281DRAFT_01341: H281DRAFT_01341 - Protein of unknown function (DUF1488), at 182,802 to 183,080
_01341
Position (kb) 181
182 Strain fitness (log2 ratio) -2
-1
0
1 at 180.144 kb on + strand at 180.175 kb on - strand at 180.233 kb on - strand at 180.233 kb on - strand at 180.441 kb on + strand, within H281DRAFT_01338 at 180.707 kb on - strand, within H281DRAFT_01338 at 180.904 kb on + strand at 181.709 kb on - strand, within H281DRAFT_01339 at 181.722 kb on + strand, within H281DRAFT_01339 at 182.115 kb on + strand, within H281DRAFT_01340 at 182.115 kb on + strand, within H281DRAFT_01340 at 182.119 kb on + strand, within H281DRAFT_01340 at 182.120 kb on - strand, within H281DRAFT_01340 at 182.120 kb on - strand at 182.154 kb on - strand, within H281DRAFT_01340 at 182.394 kb on + strand, within H281DRAFT_01340 at 182.462 kb on - strand, within H281DRAFT_01340 at 182.483 kb on + strand, within H281DRAFT_01340 at 182.489 kb on + strand, within H281DRAFT_01340 at 182.632 kb on - strand at 182.811 kb on + strand at 182.811 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 180,144 + +0.3 180,175 - +0.4 180,233 - -1.1 180,233 - +0.1 180,441 + H281DRAFT_01338 0.30 +0.5 180,707 - H281DRAFT_01338 0.68 +0.5 180,904 + +0.3 181,709 - H281DRAFT_01339 0.77 -1.1 181,722 + H281DRAFT_01339 0.78 +0.2 182,115 + H281DRAFT_01340 0.33 +0.0 182,115 + H281DRAFT_01340 0.33 +0.9 182,119 + H281DRAFT_01340 0.34 -0.6 182,120 - H281DRAFT_01340 0.34 -0.7 182,120 - -1.3 182,154 - H281DRAFT_01340 0.39 -0.1 182,394 + H281DRAFT_01340 0.73 +0.0 182,462 - H281DRAFT_01340 0.83 -0.8 182,483 + H281DRAFT_01340 0.86 -0.2 182,489 + H281DRAFT_01340 0.87 -0.6 182,632 - -0.6 182,811 + -1.8 182,811 + -2.0
Or see this region's nucleotide sequence