Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01054 and H281DRAFT_01055 are separated by 60 nucleotides H281DRAFT_01055 and H281DRAFT_01056 overlap by 4 nucleotides H281DRAFT_01056 and H281DRAFT_01057 overlap by 17 nucleotides
H281DRAFT_01054: H281DRAFT_01054 - (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 1,183,724 to 1,184,794
_01054
H281DRAFT_01055: H281DRAFT_01055 - monosaccharide ABC transporter membrane protein, CUT2 family, at 1,184,855 to 1,185,823
_01055
H281DRAFT_01056: H281DRAFT_01056 - monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-), at 1,185,820 to 1,186,803
_01056
H281DRAFT_01057: H281DRAFT_01057 - monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-), at 1,186,787 to 1,188,340
_01057
Position (kb)
1184
1185
1186 Strain fitness (log2 ratio)
-1
0
1 at 1183.917 kb on - strand, within H281DRAFT_01054 at 1184.485 kb on - strand, within H281DRAFT_01054 at 1184.485 kb on - strand, within H281DRAFT_01054 at 1184.877 kb on + strand at 1185.153 kb on - strand, within H281DRAFT_01055 at 1185.157 kb on - strand, within H281DRAFT_01055 at 1185.157 kb on - strand, within H281DRAFT_01055 at 1185.299 kb on + strand, within H281DRAFT_01055 at 1185.300 kb on - strand, within H281DRAFT_01055 at 1185.558 kb on - strand, within H281DRAFT_01055 at 1185.608 kb on + strand, within H281DRAFT_01055 at 1185.747 kb on + strand at 1185.747 kb on + strand at 1186.092 kb on + strand, within H281DRAFT_01056 at 1186.199 kb on - strand, within H281DRAFT_01056 at 1186.200 kb on - strand, within H281DRAFT_01056 at 1186.205 kb on + strand at 1186.206 kb on - strand, within H281DRAFT_01056 at 1186.301 kb on + strand, within H281DRAFT_01056 at 1186.355 kb on + strand, within H281DRAFT_01056
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 1,183,917 - H281DRAFT_01054 0.18 -0.1 1,184,485 - H281DRAFT_01054 0.71 +0.8 1,184,485 - H281DRAFT_01054 0.71 +0.1 1,184,877 + +0.6 1,185,153 - H281DRAFT_01055 0.31 -0.3 1,185,157 - H281DRAFT_01055 0.31 -0.8 1,185,157 - H281DRAFT_01055 0.31 +0.6 1,185,299 + H281DRAFT_01055 0.46 -0.6 1,185,300 - H281DRAFT_01055 0.46 +0.0 1,185,558 - H281DRAFT_01055 0.73 +0.2 1,185,608 + H281DRAFT_01055 0.78 -0.2 1,185,747 + +0.9 1,185,747 + -0.6 1,186,092 + H281DRAFT_01056 0.28 -0.0 1,186,199 - H281DRAFT_01056 0.39 -0.4 1,186,200 - H281DRAFT_01056 0.39 +1.0 1,186,205 + -1.1 1,186,206 - H281DRAFT_01056 0.39 +0.4 1,186,301 + H281DRAFT_01056 0.49 +0.5 1,186,355 + H281DRAFT_01056 0.54 +0.1
Or see this region's nucleotide sequence