Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00975 and H281DRAFT_00976 are separated by 112 nucleotides H281DRAFT_00976 and H281DRAFT_00977 are separated by 232 nucleotides H281DRAFT_00977 and H281DRAFT_00978 are separated by 366 nucleotides
H281DRAFT_00975: H281DRAFT_00975 - choline dehydrogenase, at 1,093,117 to 1,094,778
_00975
H281DRAFT_00976: H281DRAFT_00976 - LysR family transcriptional regulator, glycine cleavage system transcriptional activator, at 1,094,891 to 1,095,826
_00976
H281DRAFT_00977: H281DRAFT_00977 - hypothetical protein, at 1,096,059 to 1,096,424
_00977
H281DRAFT_00978: H281DRAFT_00978 - glutathione S-transferase, at 1,096,791 to 1,097,267
_00978
Position (kb)
1094
1095
1096 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1094.015 kb on - strand, within H281DRAFT_00975 at 1094.090 kb on - strand, within H281DRAFT_00975 at 1094.188 kb on + strand, within H281DRAFT_00975 at 1094.188 kb on + strand, within H281DRAFT_00975 at 1094.530 kb on + strand, within H281DRAFT_00975 at 1094.749 kb on + strand at 1095.187 kb on + strand, within H281DRAFT_00976 at 1095.601 kb on + strand, within H281DRAFT_00976 at 1095.876 kb on + strand at 1095.877 kb on - strand at 1095.890 kb on + strand at 1096.342 kb on + strand, within H281DRAFT_00977 at 1096.343 kb on - strand, within H281DRAFT_00977 at 1096.487 kb on + strand at 1096.491 kb on - strand at 1096.602 kb on + strand at 1096.603 kb on - strand at 1096.636 kb on + strand at 1096.636 kb on + strand at 1096.636 kb on + strand at 1096.636 kb on + strand at 1096.636 kb on + strand at 1096.636 kb on + strand at 1096.637 kb on - strand at 1096.822 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 1,094,015 - H281DRAFT_00975 0.54 -0.3 1,094,090 - H281DRAFT_00975 0.59 -0.6 1,094,188 + H281DRAFT_00975 0.64 +0.3 1,094,188 + H281DRAFT_00975 0.64 +0.5 1,094,530 + H281DRAFT_00975 0.85 +0.1 1,094,749 + -1.3 1,095,187 + H281DRAFT_00976 0.32 -3.0 1,095,601 + H281DRAFT_00976 0.76 +0.0 1,095,876 + -0.1 1,095,877 - +0.6 1,095,890 + -1.8 1,096,342 + H281DRAFT_00977 0.77 -0.6 1,096,343 - H281DRAFT_00977 0.78 -0.6 1,096,487 + -2.1 1,096,491 - +0.8 1,096,602 + +1.3 1,096,603 - -0.0 1,096,636 + +0.7 1,096,636 + +1.8 1,096,636 + +0.4 1,096,636 + -1.5 1,096,636 + +0.1 1,096,636 + +0.5 1,096,637 - -2.0 1,096,822 + +0.5
Or see this region's nucleotide sequence