Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3809 and Ac3H11_3810 are separated by 175 nucleotides Ac3H11_3810 and Ac3H11_3811 are separated by 68 nucleotides Ac3H11_3811 and Ac3H11_3812 are separated by 145 nucleotides
Ac3H11_3809 - tungsten-containing formate dehydrogenase beta subunit, at 23,704 to 25,611
_3809
Ac3H11_3810 - Transcriptional regulator, TetR family, at 25,787 to 26,407
_3810
Ac3H11_3811 - putative membrane protein, at 26,476 to 26,883
_3811
Ac3H11_3812 - Hydrogen peroxide-inducible genes activator, at 27,029 to 27,991
_3812
Position (kb) 26
27 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 25.643 kb on + strand at 25.644 kb on - strand at 25.644 kb on - strand at 25.644 kb on - strand at 25.644 kb on - strand at 25.644 kb on - strand at 25.659 kb on + strand at 25.659 kb on + strand at 25.768 kb on + strand at 25.768 kb on + strand at 25.769 kb on - strand at 25.769 kb on - strand at 25.769 kb on - strand at 26.121 kb on + strand, within Ac3H11_3810 at 26.122 kb on - strand, within Ac3H11_3810 at 26.376 kb on + strand at 26.376 kb on + strand at 26.377 kb on - strand at 26.377 kb on - strand at 26.377 kb on - strand at 26.399 kb on + strand at 26.400 kb on - strand at 26.400 kb on - strand at 26.433 kb on + strand at 26.433 kb on + strand at 26.434 kb on - strand at 26.447 kb on - strand at 26.457 kb on - strand at 26.471 kb on - strand at 26.471 kb on - strand at 26.502 kb on + strand at 26.560 kb on + strand, within Ac3H11_3811 at 26.560 kb on + strand, within Ac3H11_3811 at 26.560 kb on + strand, within Ac3H11_3811 at 26.560 kb on + strand, within Ac3H11_3811 at 26.561 kb on - strand, within Ac3H11_3811 at 26.561 kb on - strand, within Ac3H11_3811 at 26.561 kb on - strand, within Ac3H11_3811 at 26.561 kb on - strand, within Ac3H11_3811 at 26.572 kb on + strand, within Ac3H11_3811 at 26.573 kb on - strand, within Ac3H11_3811 at 26.573 kb on - strand, within Ac3H11_3811 at 26.573 kb on - strand, within Ac3H11_3811 at 26.787 kb on + strand, within Ac3H11_3811 at 26.787 kb on + strand, within Ac3H11_3811 at 26.788 kb on - strand, within Ac3H11_3811 at 26.881 kb on + strand at 26.882 kb on - strand at 26.939 kb on + strand at 26.939 kb on + strand at 26.939 kb on + strand at 26.940 kb on - strand at 26.940 kb on - strand at 26.940 kb on - strand at 26.996 kb on + strand at 27.030 kb on + strand at 27.030 kb on + strand at 27.031 kb on - strand at 27.031 kb on - strand at 27.031 kb on - strand at 27.031 kb on - strand at 27.127 kb on + strand, within Ac3H11_3812 at 27.127 kb on + strand, within Ac3H11_3812 at 27.489 kb on + strand, within Ac3H11_3812 at 27.489 kb on + strand, within Ac3H11_3812 at 27.489 kb on + strand, within Ac3H11_3812 at 27.489 kb on + strand, within Ac3H11_3812 at 27.489 kb on + strand, within Ac3H11_3812 at 27.489 kb on + strand, within Ac3H11_3812 at 27.501 kb on + strand, within Ac3H11_3812 at 27.501 kb on + strand, within Ac3H11_3812 at 27.501 kb on + strand, within Ac3H11_3812 at 27.502 kb on - strand, within Ac3H11_3812 at 27.502 kb on - strand, within Ac3H11_3812 at 27.502 kb on - strand, within Ac3H11_3812 at 27.502 kb on - strand, within Ac3H11_3812 at 27.552 kb on + strand, within Ac3H11_3812 at 27.552 kb on + strand, within Ac3H11_3812 at 27.552 kb on + strand, within Ac3H11_3812
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 25,643 + -1.3 25,644 - -0.2 25,644 - -0.4 25,644 - -0.3 25,644 - -0.2 25,644 - -0.4 25,659 + -1.7 25,659 + -2.9 25,768 + -0.6 25,768 + +0.2 25,769 - -0.4 25,769 - +1.1 25,769 - -0.1 26,121 + Ac3H11_3810 0.54 +1.3 26,122 - Ac3H11_3810 0.54 -0.3 26,376 + +0.2 26,376 + +0.4 26,377 - -2.2 26,377 - -0.5 26,377 - -0.3 26,399 + +0.2 26,400 - -0.7 26,400 - -0.6 26,433 + +0.2 26,433 + +0.4 26,434 - +0.6 26,447 - -0.7 26,457 - +0.4 26,471 - -0.4 26,471 - +1.5 26,502 + +0.4 26,560 + Ac3H11_3811 0.21 +0.9 26,560 + Ac3H11_3811 0.21 +0.4 26,560 + Ac3H11_3811 0.21 +0.1 26,560 + Ac3H11_3811 0.21 +0.2 26,561 - Ac3H11_3811 0.21 +0.5 26,561 - Ac3H11_3811 0.21 -2.1 26,561 - Ac3H11_3811 0.21 -0.1 26,561 - Ac3H11_3811 0.21 +0.9 26,572 + Ac3H11_3811 0.24 -0.3 26,573 - Ac3H11_3811 0.24 -1.6 26,573 - Ac3H11_3811 0.24 -1.1 26,573 - Ac3H11_3811 0.24 +0.2 26,787 + Ac3H11_3811 0.76 +0.3 26,787 + Ac3H11_3811 0.76 +0.2 26,788 - Ac3H11_3811 0.76 -1.6 26,881 + -0.4 26,882 - +0.2 26,939 + -0.7 26,939 + +0.1 26,939 + -1.6 26,940 - -0.0 26,940 - +0.4 26,940 - +0.2 26,996 + +0.1 27,030 + -0.5 27,030 + -0.4 27,031 - -0.3 27,031 - +0.1 27,031 - +1.3 27,031 - +0.3 27,127 + Ac3H11_3812 0.10 -1.0 27,127 + Ac3H11_3812 0.10 -0.9 27,489 + Ac3H11_3812 0.48 -0.5 27,489 + Ac3H11_3812 0.48 -1.9 27,489 + Ac3H11_3812 0.48 -0.5 27,489 + Ac3H11_3812 0.48 -0.2 27,489 + Ac3H11_3812 0.48 -0.1 27,489 + Ac3H11_3812 0.48 -0.6 27,501 + Ac3H11_3812 0.49 +0.2 27,501 + Ac3H11_3812 0.49 -0.8 27,501 + Ac3H11_3812 0.49 -1.4 27,502 - Ac3H11_3812 0.49 -2.8 27,502 - Ac3H11_3812 0.49 -3.5 27,502 - Ac3H11_3812 0.49 -2.4 27,502 - Ac3H11_3812 0.49 -0.8 27,552 + Ac3H11_3812 0.54 -2.5 27,552 + Ac3H11_3812 0.54 -2.3 27,552 + Ac3H11_3812 0.54 -1.5
Or see this region's nucleotide sequence