Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28050

Experiment: acetate 17 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 17 mM
6,112,966	+		AO353_28040	0.68	-1.8
6,112,967	-		AO353_28040	0.68	+0.2
6,112,970	+		AO353_28040	0.69	-1.2
6,112,970	+		AO353_28040	0.69	+0.8
6,112,971	-		AO353_28040	0.69	-0.1
6,112,971	-		AO353_28040	0.69	+0.8
6,112,982	-		AO353_28040	0.70	-0.4
6,112,982	-		AO353_28040	0.70	+0.1
6,112,996	+		AO353_28040	0.71	+0.4
6,112,996	+		AO353_28040	0.71	+0.9
6,112,997	-		AO353_28040	0.71	+0.5
6,112,997	-		AO353_28040	0.71	+0.5
6,112,997	-		AO353_28040	0.71	-0.8
6,112,997	-		AO353_28040	0.71	-0.2
6,112,998	+		AO353_28040	0.71	-1.5
6,112,998	+		AO353_28040	0.71	-1.2
6,112,998	+		AO353_28040	0.71	+0.5
6,112,998	+		AO353_28040	0.71	-1.5
6,112,998	+		AO353_28040	0.71	-1.2
6,112,998	+		AO353_28040	0.71	+0.8
6,112,998	+		AO353_28040	0.71	-0.7
6,112,998	+		AO353_28040	0.71	+0.8
6,112,998	+		AO353_28040	0.71	+0.8
6,112,998	+		AO353_28040	0.71	-1.4
6,112,998	+		AO353_28040	0.71	+0.2
6,112,998	+		AO353_28040	0.71	+0.2
6,112,998	+		AO353_28040	0.71	+2.8
6,112,998	+		AO353_28040	0.71	+0.2
6,112,999	-		AO353_28040	0.71	-0.2
6,112,999	-		AO353_28040	0.71	-2.5
6,112,999	-		AO353_28040	0.71	+1.2
6,112,999	-		AO353_28040	0.71	-0.4
6,112,999	-		AO353_28040	0.71	+0.8
6,112,999	-		AO353_28040	0.71	+1.4
6,112,999	-		AO353_28040	0.71	-2.3
6,112,999	-		AO353_28040	0.71	-0.2
6,112,999	-		AO353_28040	0.71	+1.6
6,112,999	-		AO353_28040	0.71	+0.8
6,112,999	-		AO353_28040	0.71	-0.2
6,112,999	-		AO353_28040	0.71	+1.5
6,112,999	-		AO353_28040	0.71	+0.4
6,112,999	-		AO353_28040	0.71	+1.6
6,113,001	+		AO353_28040	0.72	+0.8
6,113,001	+		AO353_28040	0.72	+1.2
6,113,002	-		AO353_28040	0.72	+0.4
6,113,040	-		AO353_28040	0.75	-1.2
6,113,075	-		AO353_28040	0.78	-0.6
6,113,086	-		AO353_28040	0.79	-0.1
6,113,089	-		AO353_28040	0.80	-1.2
6,113,109	+		AO353_28040	0.81	-0.9
6,113,109	+		AO353_28040	0.81	+0.8
6,113,109	+		AO353_28040	0.81	+0.8
6,113,110	-		AO353_28040	0.81	-0.2
6,113,110	-		AO353_28040	0.81	+0.8
6,113,144	+				-0.8
6,113,144	+		AO353_28040	0.85	+0.3
6,113,144	+		AO353_28040	0.85	+0.5
6,113,144	+		AO353_28040	0.85	+0.8
6,113,144	+		AO353_28040	0.85	-0.6
6,113,144	+		AO353_28040	0.85	-0.1
6,113,145	-		AO353_28040	0.85	-0.2
6,113,145	-		AO353_28040	0.85	+0.8
6,113,145	-		AO353_28040	0.85	+3.4
6,113,145	-		AO353_28040	0.85	+0.8
6,113,145	-		AO353_28040	0.85	-0.2
6,113,145	-		AO353_28040	0.85	-2.3
6,113,145	-		AO353_28040	0.85	-1.0
6,113,145	-		AO353_28040	0.85	-0.2
6,113,145	-		AO353_28040	0.85	-1.5
6,113,145	-		AO353_28040	0.85	+0.5
6,113,148	+		AO353_28040	0.85	-2.2
6,113,148	+		AO353_28040	0.85	-1.0
6,113,148	+		AO353_28040	0.85	-1.8
6,113,149	-		AO353_28040	0.85	+1.1
6,113,183	+		AO353_28040	0.88	+0.8
6,113,183	+		AO353_28040	0.88	-0.6
6,113,199	+		AO353_28040	0.89	+0.8
6,113,199	+		AO353_28040	0.89	-2.0
6,113,199	+		AO353_28040	0.89	+0.6
6,113,199	+		AO353_28040	0.89	+2.5
6,113,199	+		AO353_28040	0.89	+0.6
6,113,199	+		AO353_28040	0.89	-1.5
6,113,200	-		AO353_28040	0.90	+0.5
6,113,200	-		AO353_28040	0.90	-0.4
6,113,200	-		AO353_28040	0.90	-0.9
6,113,229	+				+0.3
6,113,230	-				-0.4
6,113,291	+				+0.8
6,113,291	+				-1.5
6,113,300	+				+0.6
6,113,301	-				-2.7
6,113,301	-				+0.0
6,113,301	-				-2.2
6,113,350	+				-1.5
6,113,362	+				+0.8
6,113,362	+				+0.4
6,113,362	+				-0.5
6,113,362	+				+1.0
6,113,362	+				+0.8
6,113,362	+				-0.4
6,113,363	-				+1.8
6,113,363	-				+0.3
6,113,363	-				-0.2
6,113,363	-				+0.8
6,113,363	-				-1.5
6,113,366	+				-0.5
6,113,366	+				-0.5
6,113,366	+				-0.5
6,113,366	+				+0.8
6,113,366	+				-1.5
6,113,366	+				+2.6
6,113,367	-				+1.2
6,113,367	-				-0.2
6,113,367	-				-0.0
6,113,373	+				-0.2
6,113,373	+				+0.8
6,113,373	+				-0.6
6,113,373	+				+2.4
6,113,374	-				+0.1
6,113,451	-				-0.3
6,113,451	-				-0.5
6,113,496	+				+1.5
6,113,501	-		AO353_28045	0.10	+0.0
6,113,501	-		AO353_28045	0.10	-0.4
6,113,501	-		AO353_28045	0.10	-0.1
6,113,501	-		AO353_28045	0.10	-0.2
6,113,514	+		AO353_28045	0.15	-1.4
6,113,515	-		AO353_28045	0.16	-2.4
6,113,535	+		AO353_28045	0.23	-0.7
6,113,536	-		AO353_28045	0.24	+0.4
6,113,536	-		AO353_28045	0.24	+0.3
6,113,590	+		AO353_28045	0.44	-0.5
6,113,590	+		AO353_28045	0.44	+0.8
6,113,590	+		AO353_28045	0.44	-0.5
6,113,591	-		AO353_28045	0.45	-1.0
6,113,591	-		AO353_28045	0.45	-0.4
6,113,591	-		AO353_28045	0.45	+0.8
6,113,591	-		AO353_28045	0.45	+0.0
6,113,591	-		AO353_28045	0.45	+0.5
6,113,591	-		AO353_28045	0.45	+1.8
6,113,591	-		AO353_28045	0.45	+1.4
6,113,591	-		AO353_28045	0.45	+0.4
6,113,591	-		AO353_28045	0.45	+0.2
6,113,678	+		AO353_28045	0.78	+1.0
6,113,709	-				-0.7
6,113,709	-				-0.8
6,113,713	+				+1.1
6,113,713	+				-0.8
6,113,714	-				-0.5
6,113,714	-				+0.1
6,113,716	+				-0.8
6,113,716	+				+1.4
6,113,716	+				-0.2
6,113,716	+				-0.7
6,113,717	-				-0.5
6,113,747	-				+1.4
6,113,771	+				-1.0
6,113,772	-				+0.8
6,113,789	+				-0.8
6,113,789	+				-0.5
6,113,789	+				-2.7
6,113,790	-				-0.2
6,113,790	-				+2.2
6,113,790	-				+1.0
6,113,936	+				+0.8
6,113,936	+				+1.4
6,113,936	+				+0.2
6,113,936	+				-1.0
6,113,937	-				-0.5
6,113,937	-				-1.2
6,113,937	-				-0.9
6,113,939	-				+0.8
6,113,939	-				-1.7
6,113,939	-				+0.8
6,113,970	-				-0.6
6,114,028	+				+1.5
6,114,137	-				-0.5
6,114,350	-		AO353_28050	0.20	+1.6
6,114,360	+		AO353_28050	0.21	-1.8
6,114,456	+		AO353_28050	0.26	-0.7
6,114,457	-		AO353_28050	0.26	-0.2
6,114,527	+		AO353_28050	0.29	+0.8
6,114,528	-		AO353_28050	0.29	-2.4
6,114,601	+		AO353_28050	0.33	+1.4
6,114,609	-		AO353_28050	0.34	-0.4
6,114,672	+		AO353_28050	0.37	+0.8
6,114,747	+		AO353_28050	0.41	-0.2
6,114,758	+		AO353_28050	0.41	-1.3
6,114,788	+		AO353_28050	0.43	+0.1
6,114,789	-		AO353_28050	0.43	+0.7
6,114,790	+		AO353_28050	0.43	-1.0
6,114,910	+		AO353_28050	0.49	-2.0
6,115,172	+		AO353_28050	0.62	-0.4
6,115,323	-		AO353_28050	0.70	-0.8
6,115,654	-		AO353_28050	0.86	-1.0
6,115,669	-		AO353_28050	0.87	+0.0
6,115,670	+		AO353_28050	0.87	+0.0
6,115,831	-				-0.5
6,115,953	-				-0.7
6,116,136	-		AO353_28055	0.37	-0.8
6,116,142	+		AO353_28055	0.38	+1.0
6,116,143	-		AO353_28055	0.38	+0.0
6,116,143	-		AO353_28055	0.38	-0.5
6,116,197	-		AO353_28055	0.48	+0.0
6,116,276	+		AO353_28055	0.61	+1.2
6,116,473	+				+1.5
6,116,586	+				+0.2
6,116,735	-		AO353_28060	0.20	+0.0
6,116,735	-		AO353_28060	0.20	-0.2
6,116,767	-		AO353_28060	0.23	+0.4